Gene Plim_1631 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1631 
Symbol 
ID9138332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp2108984 
End bp2109829 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content56% 
IMG OID 
Product3-methyl-2-oxobutanoate hydroxymethyltransferase 
Protein accessionYP_003629662 
Protein GI296121884 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCACC ATGCCCCACT CCTTCCTCAC GGTCAGGCTG AAGGATCATT CACTGGCCCC 
AGGATGACAG TTCCCCGTTT CCAGGGAGCC AAAGCTCGCG GCGAAAAACT GGCCATGGCG
ACAGCCTACG ACTTCCTCAT GGCCAGAGCT TTTGATGAAT CGGGCGTCGA TTCGGTGCTG
GTGGGAGATT CTTTAGGAAT GGTGGTGCAA GGTCGCAGTT CAACATTGCC TGTCACGATC
GACCAGATGA TCTATCATGG TGAAATCGTG GCTCGGGCCT GTCAGCGGGC GTTGGTGATC
GTCGATCTGC CATTCATGAG TTATCAGGTG AATGGCGATC AGGCAGTGGC GAATGCCGGT
CGCATCCTCA AAGAAACCGG GGCGGCGGCG GTCAAACTGG AAGGTGGTGC CTTGCAGGCC
GAAACGATTC GCCGGATTGC TGATTCCGAT ATCCCCGTGA TGGCCCATGT GGGGTTAAGA
CCACAGGCAA TGCACAAATT GGGCGGATTG GGCCGGATTC AACGCAATGC CGACGTGATT
CTGGCTGATG CGAAAGCCGC CGAGGAGGCT GGTGCTTTTG GCATTGTCCT CGAACTGATT
CCTTCGGAGA TTGCCGAACT GGTGACCAAA TCTTTGCGAA TTCCGACCAT TGGCATTGGT
GCTGGCCCAC ATTGTGATGG ACAGGTTCTC GTGGGGCCCG ATTTACTGGG GATCACGCCA
GGTTTCTCAC CCAGGTTTCT GAAGCGGTTT GCTGAGATCG ACTCGCAGAT TCGCAGTGCT
GCCCGCGCAT ATGTGCAGGA AGTCCATGCT GGCCAGTTTC CCGGGCCGGA GCATACGCAT
TCGTAA
 
Protein sequence
MSHHAPLLPH GQAEGSFTGP RMTVPRFQGA KARGEKLAMA TAYDFLMARA FDESGVDSVL 
VGDSLGMVVQ GRSSTLPVTI DQMIYHGEIV ARACQRALVI VDLPFMSYQV NGDQAVANAG
RILKETGAAA VKLEGGALQA ETIRRIADSD IPVMAHVGLR PQAMHKLGGL GRIQRNADVI
LADAKAAEEA GAFGIVLELI PSEIAELVTK SLRIPTIGIG AGPHCDGQVL VGPDLLGITP
GFSPRFLKRF AEIDSQIRSA ARAYVQEVHA GQFPGPEHTH S