Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_1631 |
Symbol | |
ID | 9138332 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 2108984 |
End bp | 2109829 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | 3-methyl-2-oxobutanoate hydroxymethyltransferase |
Protein accession | YP_003629662 |
Protein GI | 296121884 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGCACC ATGCCCCACT CCTTCCTCAC GGTCAGGCTG AAGGATCATT CACTGGCCCC AGGATGACAG TTCCCCGTTT CCAGGGAGCC AAAGCTCGCG GCGAAAAACT GGCCATGGCG ACAGCCTACG ACTTCCTCAT GGCCAGAGCT TTTGATGAAT CGGGCGTCGA TTCGGTGCTG GTGGGAGATT CTTTAGGAAT GGTGGTGCAA GGTCGCAGTT CAACATTGCC TGTCACGATC GACCAGATGA TCTATCATGG TGAAATCGTG GCTCGGGCCT GTCAGCGGGC GTTGGTGATC GTCGATCTGC CATTCATGAG TTATCAGGTG AATGGCGATC AGGCAGTGGC GAATGCCGGT CGCATCCTCA AAGAAACCGG GGCGGCGGCG GTCAAACTGG AAGGTGGTGC CTTGCAGGCC GAAACGATTC GCCGGATTGC TGATTCCGAT ATCCCCGTGA TGGCCCATGT GGGGTTAAGA CCACAGGCAA TGCACAAATT GGGCGGATTG GGCCGGATTC AACGCAATGC CGACGTGATT CTGGCTGATG CGAAAGCCGC CGAGGAGGCT GGTGCTTTTG GCATTGTCCT CGAACTGATT CCTTCGGAGA TTGCCGAACT GGTGACCAAA TCTTTGCGAA TTCCGACCAT TGGCATTGGT GCTGGCCCAC ATTGTGATGG ACAGGTTCTC GTGGGGCCCG ATTTACTGGG GATCACGCCA GGTTTCTCAC CCAGGTTTCT GAAGCGGTTT GCTGAGATCG ACTCGCAGAT TCGCAGTGCT GCCCGCGCAT ATGTGCAGGA AGTCCATGCT GGCCAGTTTC CCGGGCCGGA GCATACGCAT TCGTAA
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Protein sequence | MSHHAPLLPH GQAEGSFTGP RMTVPRFQGA KARGEKLAMA TAYDFLMARA FDESGVDSVL VGDSLGMVVQ GRSSTLPVTI DQMIYHGEIV ARACQRALVI VDLPFMSYQV NGDQAVANAG RILKETGAAA VKLEGGALQA ETIRRIADSD IPVMAHVGLR PQAMHKLGGL GRIQRNADVI LADAKAAEEA GAFGIVLELI PSEIAELVTK SLRIPTIGIG AGPHCDGQVL VGPDLLGITP GFSPRFLKRF AEIDSQIRSA ARAYVQEVHA GQFPGPEHTH S
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