Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_1595 |
Symbol | |
ID | 9138296 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 2057839 |
End bp | 2065143 |
Gene Length | 7305 bp |
Protein Length | 2434 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | excinuclease ABC, A subunit |
Protein accession | YP_003629627 |
Protein GI | 296121849 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAGAT CTGAAATCAC GATTCGTGGT GCCCGAGAAC ATAATCTGCG TGACGTCAGC CTGGTTTTGC CCAAGAACAA ACTGATTGTT ATGACGGGCG TCAGTGGCTC GGGCAAGAGC TCTCTCGCCT TTGATACGCT CTACGCCGAA GGTCAACGGC GGTACATCGA ATCCCTCTCG ACGTACGCGA GGCAATTCCT GGGATCGATG CCCAAGCCGG ATGTCGATTC GATCACCGGG CTGGCTCCTT CGATCTCGAT TCAACAGAAA ACGGCTGGTC GAAATCCGCG CAGTACCGTG GGTACGATCA CCGAGATATA CGATTACCTG CGAGTGCTGT TTGCCCGGGT TGGCCAAGCC GAATGCCACC AATGCCATCG CCCGATCACT TCCCAGTCTC CTGAGAACAT CGTCGAGCAG ATTCTCATTT TACCTGCCGG AACAAAGTTT CAGATCCTGG CACCACTCAT TCAGCGTCAG AAGGGTGAGT TTAAGGATCT TTTCGTTGAT CTTCTCAAGC AGGGTTATCT CCGCGCCAGG GTTGATGGCA AATTCATTTC GCTGAGCGAA AGTCTGCAGC TTGATAAGCA GATGAAGCAC ACGATTGATG TGGTGATTGA CCGCCTGGTG GCCGGGAAAT CGACTCGCCA GCGTGTGGCC GAAGCTGTAG AAAATGCGCT CAAACTGGCG AATGGGCAAC TCATTGTTTT GCAGGATTCT CCCGAAGAAT TCCTCTCTGC CGCTATTCAG AGTGAAGACG ATTCGCCGTC TCAGGAGAAT CCGAGCGAAC AGTTTTTTGC CACGGCTTAT GCCTGCACCC ATTGCGGTAT CAGTTACGAT CCTCCCTCGC CGCAACTTTT CAGTTTCAAC AGCCCTCAAG GGATGTGTGC CGACTGCAAC GGTCTCGGGA TGCGGCACGA TTTTTTACTT GATCGGCTCA TTCCCGATGA ATCCCTTTCT ATCCAGAAGG GAGCACTCGC ACTTTCAGGT AAACTTTCCA AGCTGGGCCG TTGGCGCAGG CATCTCATTG ATGGCGTGGC TGCGGCGATT GAAAAAACAC TGAGCCTCAA GCCCGGTGAG TTCCTGAAAA CCCCGTGGAA TGAACTGCCC CAGGGGGCGC GCGATCTCTT CCTGGATGGG CTGGGCAATC AGCATGTGAC GTACAGTTTC AAGCACTCGG GCGGAGTGTG GAAGCATGGT GGGAAGTACA CAGGCTATGT CCGCGAACTG CTCGAAGAGT ACCGTAAAGC CAAAAACCCG ATGCGCCGCA GGCAGCTTGA AAAGTATATG GAAGTCGTGG GGTGCAGCAC TTGCCACGGT TCGCGACTCA ACGCTCAGGC CTGCAACTAT TTTATCTCCA GCCAAGCATT GGAGATGACT ACGCCGGCGA TAGCACGCAG CGGTTCCTCA TCGGCGGCTT CCCAGGCGAA AAAACAGCGT CTGTCACTTC CTGGGGTTTG CCATCTCAGT GTGGGTGAAG CTTTCGAGTT TTTTGAACAG CTCGATCTGG ATCCGACTTC GCAATATATC GCTGAAGAAG TTCTTAAAGA GATTCGTGGC CGCCTGGGTT TTCTTTTGCG CTGCGGTCTC GATTACCTCG CGCTGGATCG GACGGCACCG ACGCTCAGTG GTGGAGAAAG TCAGCGGATT CGTCTGGCTG GGCAGATTGG CTGTGGCCTT GTGGGTGTGG TTTATATTCT CGATGAACCA TCGATTGGCC TGCACCCTCG CGATAACGAA ATGCTGCTGG GGAGCCTGCA GGATCTTCGC GATCAGGGTA ATACCGTGAT CGTGGTGGAG CATGACGATG AAACGATGAA GGCTGCCGAT CACATTATCG ACTTTGGCCC CGGCCCCGGT GTTCGTGGTG GAAAAGTTGT TCATGAAGGG AGTCTTGAGG CACTTCTGGC GAATGAAGAA AGTGAAACGG GAGCTTATCT CTCCGGCCGC AAGCAGATCG AAATCCGCGA AACACGTCGC TCAGGAATAG GAACATCCAT CTCGATACAA GGTTGCACGC ATCACAACCT GCAAAATGTC GATGTCGAGT TTCCACTGGG GAAGTTCATC TGCGTGACCG GTGTTTCCGG TTCAGGGAAG AGCTCGCTGA TTAACGATAT TCTGTGGCCG CTGCTCAATC GCGAAGTCAA TCTTGGTGAA GGTGCTCCCG GTGCTCATCA GAGTTTTGAC AATCTCGCAT TGGTCGATAA GGCCATCGAT ATTGATCAGT CACCGATTGG TCGTACACCC CGGTCGAACC CTACCACCTA TGTCAAACTC TTCGACCTGA TTCGTGATCT TTACACACAA CTTCCCGATT CTAAAACCCG CGGGTTTAAG CCGGGACGCT TCAGTTTTAA CGTCCCTGGC GGTCGTTGCG AGGCCTGCGA AGGGCATGGT TCGAACAAGC TTGAAATGGA CTTTCTTGCC GATATCTGGG TGACCTGCCC GGTCTGCCAG GGACGCCGAT TTAATAAAGA GACGCTGGAG GTGCGTTTCA AGGGTAAGAA CATTGCTGAA GTCCTCGATA TGGATGTTCA GACGGCACTT GAACATTTTG AAAACCTCCC CAAGATCAAA AATCTGCTGC AGACTTTGCA CGATGTGGGC CTCGACTACA TCAAGCTGGG GCAGCCCTCT CCTACCCTCT CTGGTGGTGA AGCTCAGCGG ATTAAACTCG CGAAAGAACT TGGCAAACGC AGCACTGGCA AAACCGTCTA CATTCTCGAC GAACCGACAA CTGGCCTGCA CTTCGTTGAT ATCGCCCACC TGCTGCGGGT GTTGCATGGC TTTGTGGATG CCGGGAATAC CGTCATTGTC GTGGAGCATA ATCTTGATGT CATCAAGACG GCCGACTGGG TGATCGATCT GGGGCCCGAA GGTGGCAAAG GTGGTGGCAG GATTATCGCA CAGGGGACAC CAGAAATGGT GGCCCAATGT GAGGCCTCAT ACACGGGTCG CTTTCTGGCC AGAGTCCTTG AGGCGAGCGG TCGATCAATA TCTCAGCCCG TTTCACTGGG GTCCGCAGCC ACCTCCACTG GCAAGGGGCA GGGAACGAAG AAAAGACGCA AAAGCACGGC AGATCACGTG GTTGAGATGC CACAAAAAAG TGTGGCTCGA ACTTTTCCTC CTGAGACAAA AGTCGCTTCA CCTTCCCGCT GGCAAGCAGC TTTGCCACTC AAGCAGCAAG ACCGTGAAGC ACAGACCAAC ATCGTCATTC GCGGGGCCTC CCAGCACAAC CTGCAGAAAA TCAGTCTCGA TATCCCTCGC GATCAGATGA GTGTCTTCTG TGGCCCCAGT GGTTCCGGCA AAACGTCACT CGCCATGGAT ACGCTCTACG CGGAAGGCCA GCGGCGATAC GTCGAGTCCC TTTCGTCGTA TGCCCGGCAG TTTCTTGGTC AGATGCCCAA GCCCAAAGTC GAGCATATTC ACGGTCTTCA GCCTTCGATT GCGATTGAGC AGAAGACGGT CGGCCACACG CCGCGCTCGA CGGTCGGCAC CACGACGGAA ATTTACGATT ATCTGCGTGT CCTCTATGCC CGCCTGGGAA CGCAACATTG CCCCGACTGT CGCATCGCGG TGGAATCGCA AACCACCGAC GATGTGATCG ATCTCCTCAT GGCCAAGCCG GAAGGCACCA GACTGCTGGT TCTGGCACCG CAGGAAGTTC CCGTTGGCCA GCAGTACGCC AAAGTGTGGG AACGGCTGAA AGAACAGGGC TTCAGCCGGG TACGTGTGGA CGGCACCACC TATCGACTGG AAGAAGTTCC CGAAATCGAC CGCCGGCGAA AGCATGTCGT CGAAATTGTC ATTGATCGCG TCACGATTGC CTCGGGCAGC CGCCGCCGTC TGGCTGATTC TGTCGAGGCA GCCTTTGATC AGGGCAAAGG CGTGATTCGT GTCGCCTTCG TCGATGACGA CAAGCCGGAG AACTCGTGGA AAGTTCAGCC CTTCAGTCTG TTTCGTGCCT GCTCGCAATG CGGCAGAAGT TTTGAGACAT TGGCACCACA CAACTTCTCG TTCAACAGTC CCTTGGGATG GTGCGAAAGC TGTGAAGGTC TGGGCACTCA GCAGGGCACG AACCTTGCGG CTCTCATTGG TGATCCCACA CGAACTTTAC GCGAAGGAGC CATTTCGGCC TGGCCAGACC CTCGGCAATC TCCCGCAATG TTCGAACTGT TGGACGCCCT GAGCCGGGGA GTCGGCCTTT CGCTCGACAC GCCATTTAAT CAGCTCGAAC CGGCTGAGCA GCGACTGGTT CTCTTCGGGG CTGGCGAGCA GTGGTTCACG GTTTACCAGG TGGCTCAGCC CGCAGCGGCC AAAAAGTCGA GCACCAAAGC AGCAGCGAAA TCGAAGAAAT CATCCACGGC CGATCAAGCC GTCAAATACC GCTTCCAGTT CAAAGGGCTG TACCCGGCTC TCGAAGAAGC CTCACGCGTT TCGTACTCAT TCCGCCAATC GCTGTTCGAT TTGATTGGTG AAGTTCCCTG CTCTTCATGC AGTGGCAGCC GCTTGAGAGA AGATGCCTCT GCCGTGCGCC TGCAAGGGAA GACTTTGCAG CAGTTGTGCG AATTGCCACT CAATAAAGCT CAAGAGTTTC TGCATGGACT TACACTCAAC AAAACCCAAC AGAAGATCGC GGGAGACCTG CTGGAAGAAG GGGCTGGTCG CCTTGATTTT CTGGTTGATG TCGGTCTGCA TTACCTCACC TTGAGCCGCA CACTTCCGAC GCTATCCGGC GGAGAAAGCC AGCGGATTCG ATTAGCGGGT CAGTTGGGCC GGGCGTTGAC AGGTGTGCTG TATGTTCTCG ATGAACCGAC CATCGGGCTG CATCCCAGCG ATAACGGGCG TCTGCTGCAG GCACTGAAGA AGCTGCGCGA TCTTGGCAAC ACTGTGGTGC TCGTCGAGCA TGATCGCGAA GTTCTCGCAG CCGCCGATCG ATTGTACGAT TTCGGCCCCG GTTCTGGCAG GTTGGGTGGC CTTGTCACAG CGGAAGGAAC ACCACACGAG ATCGAACACT GCGACGACTC GCTCACGGGC AGATTTCTCT CTCTTAAGGA AGATATTCTC GTTCCGACCG AACGCCGTGT CCCTGCGAGG TTTGGCAGAA GCCAGGCACC AGTTGATCGG GCGAAATCAG GTGCTGCGAC GAAAGGGAAG GCCAAGGCTC AGGTGGCAGC CACAACCAAG GCTTCTGCAA GCAAGCCTCT CTTCTGGCTG GAGTTGATTG GGGCCCGCCA GAACAATCTT CGCAATGTTG ATTTGCGGAT TCCTCTGGGG GCACTGACAG CCATCACGGG TGTGTCCGGA AGTGGCAAAA GCTCCTTGAT CGCCGACACT CTCGGCAAAG CCATTGCCCG CAAACTGCAT CGTTCGAGCG AACAGCCCGG GCCATACGAT GAACTTCTCG GGCTGGATTA CCTCAGCAAG TTGATTGTTG TCGATCAGCA GCCACTCGGA AACACCCCTG CCTCCAACCC CGCGACTTAT ACAGGCGTCT TCGAACACAT TCGTGAGCTG TTTGCTCATC TTCCTGAATC AAAGGTGCGC GGATATCGAC CCGCCCGCTT CAGCTTCAAC CGGGCTGGTG GTCGCTGCGA GACCTGCGAA GGGAATGGCC AGAAACTCAT TGAAATGCAC TTCCTCCCCG ATCTCTGGGT CGAGTGCGAT ACCTGCCACG GACGCCGCTA CAATCCTGAA ACTCTGGCGG TCAAGTTCCA GGGGAAGAAC ATTGCCGATG TGCTTGAGAT GCCCATTTCC GAAGCCGTCA AGTTGTTTGA GAGCTTCCCC AAAATTCGCG GGCCGCTGGC AGTTCTTGAT GCGATTGGTC TCGGTTATCT GACCCTCGGC CAGCCTGCGC CGACCCTTTC CGGCGGCGAG GCCCAGCGCG TCAAGCTCGC GGCTGAACTC GCCCGTCCCA GTACTGGCAG CACCCTTTAC CTGCTGGATG AGCCAACGAC AGGCCTCCAT TTTGATGATA TCCGCAAGCT GCTCAAGATC CTGCAAAGCC TGGTCGATGC GGGGAATACC GTCGTCGTCA TTGAACACAA CCTCGATGTG ATCAAAACCT GCGACTGGAT TGTTGATCTC GGCCCCGCTG CCGGCAGCGA AGGGGGCTAC ATCGTGGCGA CGGGAACTCC TGAAGATCTC GTCCGCATCG CTCAAGGGGA AGTTCCAGAT GATGACCCAT CGAAGAAAAA TCCTCAGCAG CATGTCTCGT TGACTGCTCA ATGTCTCGCC CCGGTTCTGG AAGCGAGCCG CAAGGGAGCC CGCGAAGTCT TTGATGCGAA GGCCGCCCTC GCGCGCCGAC GGGATGATCT TGATCTCAAG TCGCTCGGCA AGAGTGCCAA AATGCCCTGG GAGGTCGATG GCCGCAAGTG GCATCTGGTC GATCACCTGG CCAATTCGGG TCGTCCTGCG AAATGGCCTG TCTCGCTTCT GGAAACGATC TTTGAACCGT TAGAGGAGGA TTCAGGCGTC ACTGTTGTCT GGAATGATCG CAGTGTGATT GAAGCTAAAT CGAAAGGGAT TCCCAGCTGG TTTATTCATG CACTGACGGG CGATGAATGG CTGCTGCAGG CCAAGTTCCG CGTGGCGAAG GGGACGTTCG ACCAGACGGA ACTCGCTGAA TCTCTCGATC TTCTCGATAT CGACGATCTC GATGAACTCC CCATTTACAA CCGGGCCGAG CGAGTCCGGG TGAAGGCTAT GGCGGGGGGC TTGCAGGAGG TCACGATCTC TCTGGCGAAG GCTGATGATG TCGCCACACC TGCCTTCGCC AGCTTCTTCA AAGAGGCACT GGCCAGCTAT CTTTCGCTGG GCGAAAAAGC CGAGGCGTCG AATCCCGAAG ACCTGATGCC CTGGAAGAAA CTGGGTCGCA AATGGCACGT CATGCGGAAA GGTTTTTTGA AGGGGAAAGT GCTCTGGGAA CCGGCCGTTG CCGAGGCTCT GTTTGAATTG ATGGAGACCA CCTTCCCGGC GGCGGAAGTT GACTGGACGC AGAAGATGCT GGTGAAGTAC CGCGTGGTTC CTGCCAAGGC AGACGCCAAA GCCGGTGCGA AGCCCCGCGT CCTGGCGAAC ATCATTACGA AACGCACTGG CAGCCTCGAT CTTGAACTCT TCGCCCCTGC AGGAACCGCC GGCAGCAAAC CCATCACCCT GGGAGAAATC CGCGACCTGG GTGAAGACCC CGCGATTGAA ACCAACTCGG ATGGCGAACA AGTCATCAAA CTCAGCTTCG TGACAGCCGA TCAGGTGAAG AAACCGACGC TATTGAAGCT GTTGAAGAAG CTGGGTGGAA TTTAA
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Protein sequence | MTRSEITIRG AREHNLRDVS LVLPKNKLIV MTGVSGSGKS SLAFDTLYAE GQRRYIESLS TYARQFLGSM PKPDVDSITG LAPSISIQQK TAGRNPRSTV GTITEIYDYL RVLFARVGQA ECHQCHRPIT SQSPENIVEQ ILILPAGTKF QILAPLIQRQ KGEFKDLFVD LLKQGYLRAR VDGKFISLSE SLQLDKQMKH TIDVVIDRLV AGKSTRQRVA EAVENALKLA NGQLIVLQDS PEEFLSAAIQ SEDDSPSQEN PSEQFFATAY ACTHCGISYD PPSPQLFSFN SPQGMCADCN GLGMRHDFLL DRLIPDESLS IQKGALALSG KLSKLGRWRR HLIDGVAAAI EKTLSLKPGE FLKTPWNELP QGARDLFLDG LGNQHVTYSF KHSGGVWKHG GKYTGYVREL LEEYRKAKNP MRRRQLEKYM EVVGCSTCHG SRLNAQACNY FISSQALEMT TPAIARSGSS SAASQAKKQR LSLPGVCHLS VGEAFEFFEQ LDLDPTSQYI AEEVLKEIRG RLGFLLRCGL DYLALDRTAP TLSGGESQRI RLAGQIGCGL VGVVYILDEP SIGLHPRDNE MLLGSLQDLR DQGNTVIVVE HDDETMKAAD HIIDFGPGPG VRGGKVVHEG SLEALLANEE SETGAYLSGR KQIEIRETRR SGIGTSISIQ GCTHHNLQNV DVEFPLGKFI CVTGVSGSGK SSLINDILWP LLNREVNLGE GAPGAHQSFD NLALVDKAID IDQSPIGRTP RSNPTTYVKL FDLIRDLYTQ LPDSKTRGFK PGRFSFNVPG GRCEACEGHG SNKLEMDFLA DIWVTCPVCQ GRRFNKETLE VRFKGKNIAE VLDMDVQTAL EHFENLPKIK NLLQTLHDVG LDYIKLGQPS PTLSGGEAQR IKLAKELGKR STGKTVYILD EPTTGLHFVD IAHLLRVLHG FVDAGNTVIV VEHNLDVIKT ADWVIDLGPE GGKGGGRIIA QGTPEMVAQC EASYTGRFLA RVLEASGRSI SQPVSLGSAA TSTGKGQGTK KRRKSTADHV VEMPQKSVAR TFPPETKVAS PSRWQAALPL KQQDREAQTN IVIRGASQHN LQKISLDIPR DQMSVFCGPS GSGKTSLAMD TLYAEGQRRY VESLSSYARQ FLGQMPKPKV EHIHGLQPSI AIEQKTVGHT PRSTVGTTTE IYDYLRVLYA RLGTQHCPDC RIAVESQTTD DVIDLLMAKP EGTRLLVLAP QEVPVGQQYA KVWERLKEQG FSRVRVDGTT YRLEEVPEID RRRKHVVEIV IDRVTIASGS RRRLADSVEA AFDQGKGVIR VAFVDDDKPE NSWKVQPFSL FRACSQCGRS FETLAPHNFS FNSPLGWCES CEGLGTQQGT NLAALIGDPT RTLREGAISA WPDPRQSPAM FELLDALSRG VGLSLDTPFN QLEPAEQRLV LFGAGEQWFT VYQVAQPAAA KKSSTKAAAK SKKSSTADQA VKYRFQFKGL YPALEEASRV SYSFRQSLFD LIGEVPCSSC SGSRLREDAS AVRLQGKTLQ QLCELPLNKA QEFLHGLTLN KTQQKIAGDL LEEGAGRLDF LVDVGLHYLT LSRTLPTLSG GESQRIRLAG QLGRALTGVL YVLDEPTIGL HPSDNGRLLQ ALKKLRDLGN TVVLVEHDRE VLAAADRLYD FGPGSGRLGG LVTAEGTPHE IEHCDDSLTG RFLSLKEDIL VPTERRVPAR FGRSQAPVDR AKSGAATKGK AKAQVAATTK ASASKPLFWL ELIGARQNNL RNVDLRIPLG ALTAITGVSG SGKSSLIADT LGKAIARKLH RSSEQPGPYD ELLGLDYLSK LIVVDQQPLG NTPASNPATY TGVFEHIREL FAHLPESKVR GYRPARFSFN RAGGRCETCE GNGQKLIEMH FLPDLWVECD TCHGRRYNPE TLAVKFQGKN IADVLEMPIS EAVKLFESFP KIRGPLAVLD AIGLGYLTLG QPAPTLSGGE AQRVKLAAEL ARPSTGSTLY LLDEPTTGLH FDDIRKLLKI LQSLVDAGNT VVVIEHNLDV IKTCDWIVDL GPAAGSEGGY IVATGTPEDL VRIAQGEVPD DDPSKKNPQQ HVSLTAQCLA PVLEASRKGA REVFDAKAAL ARRRDDLDLK SLGKSAKMPW EVDGRKWHLV DHLANSGRPA KWPVSLLETI FEPLEEDSGV TVVWNDRSVI EAKSKGIPSW FIHALTGDEW LLQAKFRVAK GTFDQTELAE SLDLLDIDDL DELPIYNRAE RVRVKAMAGG LQEVTISLAK ADDVATPAFA SFFKEALASY LSLGEKAEAS NPEDLMPWKK LGRKWHVMRK GFLKGKVLWE PAVAEALFEL METTFPAAEV DWTQKMLVKY RVVPAKADAK AGAKPRVLAN IITKRTGSLD LELFAPAGTA GSKPITLGEI RDLGEDPAIE TNSDGEQVIK LSFVTADQVK KPTLLKLLKK LGGI
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