Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_1556 |
Symbol | |
ID | 9138256 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 2004309 |
End bp | 2006342 |
Gene Length | 2034 bp |
Protein Length | 677 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | Redoxin domain protein |
Protein accession | YP_003629588 |
Protein GI | 296121810 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.744848 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGGAT CGACACCATC TTTTCTGAAG CCGCTGGTGT GCGTCGGGGG ATTACTGGCA GGGTCTTTGG CGTTACTCCC GACTTTTGCG GTGGAAAATG TGCCGCAGGC CTCTGCCACA GCAGGGAGCC CGCAGGGAAA GTTGGCAGGT CTTTCCGAGC TGACTGATAA AACCTGGAAA GATGTGGAAG GAAACGTCTG GACGTTTCCG AAGTCGGAAA CTTCACCTGT TGTTGTGGTG GCGTTTCTGG GGACTGAGTG CCCTTTGGCT TTGCAGTATG CGAAGACGTT GAATCTGCTG GCAGAACGAT TTGCCAATCG AGGCGTGCAA TTCGTGGGGG TTAACGCCAA TCCTCAAGAT TCTCTGGCCG AGATTCAGGC TCAAGCCCGA CGCCAAAAAC TGAGCTACCC GATTCTCAAG GATATTCATC AAGACTGGCT CAAGGCGTTA GGGGCTGAGC GAACGCCTCA AGTGGTGGTT CTCGATCAAA ACCGCGTCAT TCGCTATAGC GGTCGAATCG ACGACCAGCA CGGGATTGGG AAATCGAGGC CAGCTCCGAC TCGCGAAGAT CTGGCTTTGG CTGTCGAACA GATTCTGGCA AAGAAAAACG TCGAAATCAG CAAGACCGAA GTCATTGGCT GCCTGATCGG CCGGTTGAGT TCACCGAAGG CCCAACCTCA AGTGACATGG GCCAAAGACA TCGCACCGAT CCTCGACCAG CACTGTGTCG AGTGCCATCG ACCCGGTGAA ATCGGGCCCT TCAGCCTTGT GAATTACGAG GAGACGGCGG GTTGGGCCGA GATGATTGCC GAAGTGACCA GCGAGCGAAG AATGCCTCCC TGGCATGCGG AAGAATCGCA TGGCAAATTC CTCAATGAAC GCCGACTCTC TCAAAAGGAA ATTGACACAT TGAAGCAATG GGTCGCTGAG GGGACTCCGG CAGGAGACGT TTCACAAAGA CCTCCTTTGC CAGTTTTCAC CAATGGTTGG CAATTGCCAC GTCAGCCGGA TCAGGTGGTG TGGATGAGCG AGCGGCCGTT CTCTGTCAAA TCGACCGGTG AAGTCAAATA TCAATATTTC TCGGCAGATC CCGGGATCAC TGAAGATCGC TGGATTTCGG GTGTTGAGGT GCAACCCGGG AACCGGGCTG TGGTCCATCA CGTCATTGTG TTCCTGAGTG AGGATGGCAA AAAGTTTGAT CACGATAAGC AGTTTCTGGT GGCGTATGTG CCTGGCTTGA GATTGAAGCC ACTCCCGGAA GGCTATGCGA AGCGGATCCC GAAGGGTTCC AAGTTCATTT TTCAGGTGCA TTACACTCCG AATGGTGAAG CTCAGGAAGA TCGCACAAAA GTCGGGCTGA TCTTCGCTGA TCCTGCCAAA GTGACGCATG AAGTCAAAAC CGAGAGTGTG GCTCAACTTC GTTTTCGGCT AGAGCCCTAC AAAGACAATC AGCGCGTTGA CGCCAAGCCG ACAAAAGCTC CCGTCGAGTT GGAATTGCTG TCGATGTCAC CTCATATGCA TCTCCGGGGG AAATCCTTCC GTTACGAACT GCAGCCACCC GGTGGGGAAC GACAAGTCGT ACTCAATGTT CCCCATTACG ACTTCAACTG GCAGACGCAA TATCGTCTGG CAGAACCCAT CAAGGTGGCT CGTGGCTCGA CTCTGTATGC CTCGGCAACA TTTGATAATT CGCCAGATAA CCTCGCTAAT CCTGACCCTT CTCAGGTTGT CACCTGGGGG GATCAATCCT GGGAAGAGAT GATGATTGGC TACTTCGATA TCGCGATCCC TCGCTCAACC GCAGGGAGTG CCAACCTCAT GACTGACTGG CTCGATTCCA AGGAGGGGCC CCGCAAACTC CTCAAAGCTC TCGATCGCAA TGGCAGTGGA GAAGTCGACG AGAGCGAGGT TCAGTCGGGC CATCGGCAGT TTCTCAAGCA GATCGATGCC GACAACTCTG GTGGATTGAG TGAGGAAGAG CTCCGCAGTA ACTGGACGAA AGTGCTCAAG GCGATTTCTG CGAAAAAATC ATAA
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Protein sequence | MSGSTPSFLK PLVCVGGLLA GSLALLPTFA VENVPQASAT AGSPQGKLAG LSELTDKTWK DVEGNVWTFP KSETSPVVVV AFLGTECPLA LQYAKTLNLL AERFANRGVQ FVGVNANPQD SLAEIQAQAR RQKLSYPILK DIHQDWLKAL GAERTPQVVV LDQNRVIRYS GRIDDQHGIG KSRPAPTRED LALAVEQILA KKNVEISKTE VIGCLIGRLS SPKAQPQVTW AKDIAPILDQ HCVECHRPGE IGPFSLVNYE ETAGWAEMIA EVTSERRMPP WHAEESHGKF LNERRLSQKE IDTLKQWVAE GTPAGDVSQR PPLPVFTNGW QLPRQPDQVV WMSERPFSVK STGEVKYQYF SADPGITEDR WISGVEVQPG NRAVVHHVIV FLSEDGKKFD HDKQFLVAYV PGLRLKPLPE GYAKRIPKGS KFIFQVHYTP NGEAQEDRTK VGLIFADPAK VTHEVKTESV AQLRFRLEPY KDNQRVDAKP TKAPVELELL SMSPHMHLRG KSFRYELQPP GGERQVVLNV PHYDFNWQTQ YRLAEPIKVA RGSTLYASAT FDNSPDNLAN PDPSQVVTWG DQSWEEMMIG YFDIAIPRST AGSANLMTDW LDSKEGPRKL LKALDRNGSG EVDESEVQSG HRQFLKQIDA DNSGGLSEEE LRSNWTKVLK AISAKKS
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