| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_1535 |
|---|
| Symbol | |
|---|
| ID | 9138235 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | - |
|---|
| Start bp | 1980783 |
|---|
| End bp | 1982330 |
|---|
| Gene Length | 1548 bp |
|---|
| Protein Length | 515 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | Serine/threonine protein kinase-related protein |
|---|
| Protein accession | YP_003629567 |
|---|
| Protein GI | 296121789 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.337625 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGTCA AGACCGACAT AGCTGGTGTC GTCATTGATG GGGCTCGCTA CGAAGTTCGC
TCCAAACTGG GCGAAGGGAG TATGGGTCTG GTCTACCGGG CTTTTGATGC CCGTTTGCAG
ACCGAAGTCG TTCTTAAAGT GCCGACTGCC GCCACGTTGA GCGATCCGGA GTTTGCGGAA
CGATTCCAGC GGGAAATTCG CTCTCTGGTA CAGCTCAAGC ATCCGCATAT CGTCACAATC
CACGATGTGG GTGATCACGA AGGTGTGCCC TATGTGGTGA TGCAGTATCT TTCGGGTGGC
AGTTTGCGAG ATCGCATTTA CGAAGGCTCA CAGCAGGTCG CACAACCTCC ATCATCGTTG
CAAGACTGGC TGATGAACGT CGCCCGCGCT CTCGATTTCA TCCATCAGCA ACATTTCATT
CACCGCGATG TCAAACCGGC CAATATTCTC TTTGATCAGT TTGGAAATGC CTACCTCAGT
GATTTTGGTC TCGCCAAAGC ACTTTCTGCC ACCCAGGAAG AACCTGCCAA GCGAGATGCA
TCGCTGACAG CAGCCGGATT TCTCGTCGGG ACACCGAACT ATGTGGCTCC AGAGTTGATT
ATGGGCCACG CGATCGATGG TCGTGTTGAC CAGTACTCTC TGGCCATGAC TGTCTACGAA
TGTTTAGCGG GCTGTGTTCC CGTGGAAGGT CCCACAGCCT CCGCCACCAT GGTGAATCAG
ACAGGGATGA AGATTCCCCC GTTGAGTAAG TATCAGGCGA ATCTCTCTGA CCGACTTTCA
GAGGCCGTCA TCAAAGGCCT GGCCAAAAAT CAGGCCCGGC GTTACGCCAA CTGTGTCGAG
TTCGCTGAAG CGGTGCTGGA AGCCGCCTCT CAAAGAAGCT CTTCGCGTCT TGCCGCTAGT
GGAACAGTCA CGCTACCGAC AGCGTCGATG GTCGCCGAGC GGGAAGCTGC CACTGCTGCC
CGAAGTGGTT CCATCACTCC CTCGCCTGCG AACAGTGCTT CGCAGCGTAT GGCGAAGATT
TCACGCGGCA CCCCGGGCAG TGTCCCTTGC CCCGAGTGTG GCAAGGTTCT GCCACTCAAA
CCTCAATTTG CGGGGAAAAA GGCTCGTTGT GCAAAATGCC TGAGTCTGCT CCTCATCGGG
CCCGATATTG CTTCGCTTAA ATGGATTGCC CCACCACCCA AGGCTGAACC GGAAGAGGAA
GATCTGCCAC AGGCACCACT TTCTTCTGCC CCTAAAATCA GACGCCAAAA AAGTGGTCAG
GCAAGTACTT CCCGCAATGC GCAGTCCAAA ACAGCCAAAA GCAGACAGCT CAGCGATTCA
GAAATTGACG CGCTTCTCGG GGAAGAAGTT TTTGGTTGGC GATTCTCCAA GAAAGCCATC
GCGATTGTGG GCGGAAGTGT CCTGATCGTC ACGCTCATGG CCTGTGTCTT GATTGGTTGG
TGGTTCAACG CTCAAGAACT GAGAAAAGAG CGAGAACAGA TGCGTATCAA AACACTGGGA
AATCGAGAAA TCAACAAGGG ACAGAAACCT AGCCGAGAAG AGGATTAA
|
|---|
| Protein sequence | MSVKTDIAGV VIDGARYEVR SKLGEGSMGL VYRAFDARLQ TEVVLKVPTA ATLSDPEFAE
RFQREIRSLV QLKHPHIVTI HDVGDHEGVP YVVMQYLSGG SLRDRIYEGS QQVAQPPSSL
QDWLMNVARA LDFIHQQHFI HRDVKPANIL FDQFGNAYLS DFGLAKALSA TQEEPAKRDA
SLTAAGFLVG TPNYVAPELI MGHAIDGRVD QYSLAMTVYE CLAGCVPVEG PTASATMVNQ
TGMKIPPLSK YQANLSDRLS EAVIKGLAKN QARRYANCVE FAEAVLEAAS QRSSSRLAAS
GTVTLPTASM VAEREAATAA RSGSITPSPA NSASQRMAKI SRGTPGSVPC PECGKVLPLK
PQFAGKKARC AKCLSLLLIG PDIASLKWIA PPPKAEPEEE DLPQAPLSSA PKIRRQKSGQ
ASTSRNAQSK TAKSRQLSDS EIDALLGEEV FGWRFSKKAI AIVGGSVLIV TLMACVLIGW
WFNAQELRKE REQMRIKTLG NREINKGQKP SREED
|
|---|
| |