| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_1493 |
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| Symbol | |
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| ID | 9138190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 1924290 |
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| End bp | 1925795 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | protein of unknown function DUF404 |
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| Protein accession | YP_003629525 |
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| Protein GI | 296121747 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0051317 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCCAG TGCTGGCGTC CGTTCCTGAC GTAGCTCTCA GCTTTGCTGA GTACCAGACC
GAGGGTTTTC ACGACGAACT GTTTCTCGCG GATCAGACGC CAAGACCTGA AGCCGGCCCG
ATCATCCAAA GAATCAATTC GCTACCGCCG GGTGAGTTAA TGCGCCGACA GGCGGCCGCT
GAACGCCTTT TGCTGCAACT GGGCATCACG TTTAACGTCT ATGGAGACAA TCAGGGCGCC
GAACGTATCT TCCCGTTCGA CATCATCCCC CGAATCGTAC CGGCCCATGA ATGGGAATGG
CTCGAACGGG GCTTAAAACA ACGAATTCAA GCTCTCAACC TTTTCATTAA CGATATCTAT
CACGATCAGC AGATCATCAA GGATGGAGTG ATACCAGCAG AAATTCTGCT GGATGCGAAG
AGTTACCGCG AGCAATGCCA CGGGATCAAC CCGCCGCACG GGATCTGGTG CCATGTCACC
GGGACAGACC TTGTACGTGG AGGCGATGGG CAGATCTATG TACTGGAAGA TAACCTGCGC
TGCCCATCGG GTGTCTCCTA TGTGCTGCAG AATCGCTCGA TCATGAAACG GACATTCCCA
CAGGTGTTCG ATCTCAGTCG TGTGCGTCCA GTCGGTGATT ATCCGCTTCG ATTACTGAGA
ACGTTAGAGC ATCTTTCACC GCGGGATGTC GCCAATCCGC GCGTGGTGGT GCTCACACCA
GGCGTCTTTA ACTCAGCCTA TTACGAGCAT TCGTTCCTGG CACAGCAGAT GGGTGTCGAA
CTCGTCGAAG GACGGGATCT GGTTGTTGCC GGTGAAAAGC TATACATGCG GACGACCTCT
GGCCTCGAAC AGGTTGATGT GATCTACCGT CGCATTGATG ACGATTTTCT TGATCCGAAA
GCCTTCCGGG CTGATTCCAT GCTCGGCGTG GAAGGGCTGA TGAATGTTTA TCGTGCAGGA
CGGGTGGCGC TGGCGAATGC ACCAGGCACT GGAGTGGCCG ATGACAAAGT GATCTATGCG
TATGTCCCGA AGATCATCAA GTACTACCTC AATGAAGAGG CTATCATTCC GAACGTCCCC
ACCTACATTT GCGAAAATCA GGATGAAAGA GCCTATGTCC TCGATCATCT GGATGAACTG
GTTGTCAAGG CGGCCAATGA ATCGGGAGGA TATGGCATGC TGGTGGGTCC CCATTCAACC
AAAGAGCAGC AGGCTCAATT CGCTGAACTG ATTAAAGCCA ATCCGCGGAA CTATATTGCG
CAGCCGACAC TCTCGCTTTC GAGAGTACCA ACAATCTGTG GAGATCATTT TGAGGGTCGG
CATGTCGATC TCAGGCCTTA CATCCTCTAT GGTAAAGAAA TTTTCGTGCT TCCAGGCGGA
CTGACCCGCG TGGCCTTAAG AAAAGGCTCA CTCGTCGTAA ACTCTTCTCA AGGGGGTGGA
AGCAAAGACA CATGGGTCAT TGCCACCAAT CAGGAACAGC TGACACCACA ATCAGCGACC
CCTTAA
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| Protein sequence | MNPVLASVPD VALSFAEYQT EGFHDELFLA DQTPRPEAGP IIQRINSLPP GELMRRQAAA
ERLLLQLGIT FNVYGDNQGA ERIFPFDIIP RIVPAHEWEW LERGLKQRIQ ALNLFINDIY
HDQQIIKDGV IPAEILLDAK SYREQCHGIN PPHGIWCHVT GTDLVRGGDG QIYVLEDNLR
CPSGVSYVLQ NRSIMKRTFP QVFDLSRVRP VGDYPLRLLR TLEHLSPRDV ANPRVVVLTP
GVFNSAYYEH SFLAQQMGVE LVEGRDLVVA GEKLYMRTTS GLEQVDVIYR RIDDDFLDPK
AFRADSMLGV EGLMNVYRAG RVALANAPGT GVADDKVIYA YVPKIIKYYL NEEAIIPNVP
TYICENQDER AYVLDHLDEL VVKAANESGG YGMLVGPHST KEQQAQFAEL IKANPRNYIA
QPTLSLSRVP TICGDHFEGR HVDLRPYILY GKEIFVLPGG LTRVALRKGS LVVNSSQGGG
SKDTWVIATN QEQLTPQSAT P
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