Gene Plim_1489 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1489 
Symbol 
ID9138186 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp1918402 
End bp1919433 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content52% 
IMG OID 
Productphosphate ABC transporter, inner membrane subunit PstC 
Protein accessionYP_003629521 
Protein GI296121743 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.111462 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGTGG TCGAACAAAA GCCCGCGAGT ACCGACTCGG TCATCGACCG CACGAATCTG 
GAGGCCTCCG GTCTGGCCTA TCGCTTCACG TGGCATAGGC TCCGTGAAAG CTTCATTCAA
ATGTTGCTGT TTCTTTGTGC TCTCCTTTCG GTGTTAACAA CACTGGCCAT TATTTTCGTA
CTGGTCAGTG AGGCGATCTT TGGAATTCCC CCGGAAAAAG CCTTCTTTCA AGAGATCAGC
CTCTCTCAGT TTTTCCTGGA AACCCGGTGG GCTCCGCAAT ACAGCCCCCC CGTGTTCGGC
ATCTGGCCAC TGATCTGCGG AACGTTCCTC ATCACGATCA TCGCCGCGAT CATTGGATTG
CCGACTGGAT TGCTGGCTGC TGTCTATCTG GCGGAATATG CATCACCACG CGTTCGTTCG
ATCGCCAAGC CAATTCTTGA ACTTCTGGCT GGTGTTCCCA CAGTCGTCTA TGGCTATTTT
GGCCTGAGGA TTGTGACGCC ATACGTCATA CGGCCTATTC TCAAACCTGC CGAATTCTTT
GGTGTCGACT GGCTGTGGAG TATTCCGGTC GATGGCTTCA ATGCATTGAG TGGCGGGATT
GTCGTGGGAT TGATGATCAT TCCGACGGTC TGCTCGCTCA GCGAAGATGT TCTTCGTGCA
GTACCGCGAA CCTTACGAGA AGCTGGTTAC GCACTGGGTT CGACAAAGTT TGATGTTTGT
GTGCGCGTGG TGATTCCATC TGCACTTTCC GGGATCATCG CAGCATTTCT GCTCGCTATC
TCTCGTGCCG TCGGCGAGAC AATGGCAGTG ACGATTGCTG CCGGTCAAAA ACCAACGTTA
ACACTCAATC CCCTCAGCCA GATTGAAACG ATGACAGCCT ACGTGGTGAA TGTCATGTCG
GGCGATACGC CAGTGGGCAC GATTGAATAT AAAAGTCTGT ATGCCGTCGC TCTGGTGCTC
TTTCTGACCA CGTTGACGAT GAATCTGATC TCCCAGCTGG TGCTTGCACG TTATCGTGAG
GTGTACCAGT GA
 
Protein sequence
MSVVEQKPAS TDSVIDRTNL EASGLAYRFT WHRLRESFIQ MLLFLCALLS VLTTLAIIFV 
LVSEAIFGIP PEKAFFQEIS LSQFFLETRW APQYSPPVFG IWPLICGTFL ITIIAAIIGL
PTGLLAAVYL AEYASPRVRS IAKPILELLA GVPTVVYGYF GLRIVTPYVI RPILKPAEFF
GVDWLWSIPV DGFNALSGGI VVGLMIIPTV CSLSEDVLRA VPRTLREAGY ALGSTKFDVC
VRVVIPSALS GIIAAFLLAI SRAVGETMAV TIAAGQKPTL TLNPLSQIET MTAYVVNVMS
GDTPVGTIEY KSLYAVALVL FLTTLTMNLI SQLVLARYRE VYQ