Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_1449 |
Symbol | |
ID | 9138145 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 1865244 |
End bp | 1867706 |
Gene Length | 2463 bp |
Protein Length | 820 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003629482 |
Protein GI | 296121704 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.669353 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATGAAAT TCTGGTTCGC TCGCAACTTA AGTATTGCCT GCCTGCTGAT GGGCCTTGCG ACCGCTGGAC ATGTTCTGGG TGCCGACCCT GTTGTAAGAA ATGTCATGCC TCGTGGTGCA CAACGAGGGA CAGAAGTCGA ACTCTCATTC AACGGCGAGC GGCTCGGCGA CGCTGCTGAA GTGATCATGT ACGAGCCGGG AATTGAAGTC CTCGATTTCA AAGTCGAGAA CGACAAACTC GTCAAGGCAC GCGTCAAACT CAGTTCAGAT CAGACGCCAG GGATTCGGCA TCTAAGGCTC CGTACCAAAA GTGGCATGTC CAAGACGCAA AATTTCGCCA TCTCGGCCTT GCCTGTTGTT GAAGAAGTTG AACCGAACAA TGAGTTCGCT AAGCCACAGG TGATTTCGAA CAACGTGACA ATCAACGGCG TCGTAACGAA CGAGGATGTC GATTACTTTG TCGTCGATGC GAAAGCTGGT GAGCGGTTGA CTGCGGAAGT TGTCGGCATC CGCCTGGGTA ACTCGATGTT CGATCCGTAT GTGTCGATCA TCAATGAATC ACGATTTGAA CTGGCTGGCA GTGATGATGC GGCTTTTGGC ACTCAGGATG GCGTGGCTTC GATAGTCGTC CCCACTGATG GTAAATACAT CCTGATGGTC AGAGAGTCGA GTTATGGCGG GTCGGGTGAT AGCTATTACC AGCTCCATAT AGGAAACTAT CCCAGGCCAC TGGCAATTGT CCCAGCCGGT GGTAAACCTG GAAGCACCGT TTCGGTCACT TATTACGGGG ATGTCAAGGG CCCTTTGACG CGAGATGTAG TGCTACCAAC TCTGGAAAGT CTTCCAGCAT CTTCCCCGTT GAACTTTGCC CTTTCAGCGA GTGATGATTC GGGAACTTCG CCTACTGGTA ACGCATTTCG GCTGACAGAT CTTGAGAATG TGATCGAAGC GGAGCCGAAT GATTCGATGG AGCAGGCTCC TTTGGCTGTC CTGCCCGCCG CAATGAATGG CATTCTGCAA ACGGAGGGCG ATCGAGACCT GTTCGCCTTC GAAGCCAAAA AAGGCGAGAA TTTCGAGTTC GTTGTTTACG GAAGACGATT GCGTTCCGAG ATTGATTCTG TGCTGCAGAT CTGGAATGAC AAAGGGAATG CAGTCGCCAA TAGCGACGAC TCCCCCGGCA CTCCCGATAG TCAGCTTCGG TTCAATTGCC CTGCGGATGG TAAATACTTT GTCATGATTC GCGATCATCT GGGTCGTGGA GGGAATGCCT ATCATTACCG GATTGAAGCA AACCCGATTA CGCCTCGTCT CGATTTTTCG ATTAATGAAT TTGTCCAGTT TCAGGAAGAT ACGCTCGAGT TACCCGCTGG TGGGCGATTG CCATTCCTGG TAACAGCCAC AAGACGGGAT GTCGGCGGGC CCATTGAGTT TCGCAGTGAA AATCTTCCTC AGGGCGTCAC GATCGAGGCT CCTCAACTGG CGGATGGCCA AGGGGTGGCT CAGGTCGTCT TGGTCGCAGC TCCTGATGCA CCGCTGAGTC TGAAAATGTC TCAGATTGTG GGTTTCATCG CCGCAGATCC CAATCGGCAT GTTGAAAGTC GAGTGAGGCA GGACGCCATC ATGGTCCGCG GCCAGAACAA CCGTCCGTTC TTTATCGAAG CGCTACCTTC CTTGGGAGTT TCCGTGGTGG AACCAGTCCC TTTTTCCGTG GAAATTGTTC AACCCAAAGT CCCGCTGATT AAAAACAGTC CTTTGAAGTT AAAGCTGATT GCCAAACGAG AAGGCGACTT CAAAGGTCCC ATCAATGTCG AGTTGCTGCA GAATCCACCA GGTGTCAATT CAAGTCGCAA TGCAGTCATC GCTGAAGGGC AGACGGAGAC CGTGATTGAC GTGAATGCTG CTGGAAATGC TCCCGCAGGT GATTGGAAGA TTTGTGCCCG AGTTCGTGCG GATGTGGGAG GAAGTCGTGT TTCCGCCTCG CCGTTTGTTG CGCTGAAAGT CGCTGAGCCT TACGTCAAGC TGGAGTTCGC AAAGTCCGCT ATCGAGCAGA ATGCAGAAAT CGATTACCCG GTAAAAGTTG AGCAGGTCAC ACCGTTTGAG GGGACTGCCA AGGTCGTGTT GATGGGGTTG CCTCATCAAA CAACCGCCGA GCCACTGGAG ATGACTAAAG AGACGCAGGA GTTGGTATTC AAGATTAAAG CCGGACCTGA AGCACCAGTC AGCAAAAACA AGAATCTTTT CTGCCAGATT ATCATTCAGC AGGAAGGTGA AGAAGTGATT CATCATTTAG GGAGCGGCGA ACTGCGGATT GACAAGCCGT TGCCACCCAA AACGACGCCT GCACCCGCTC CCACTCCTCA AGTTGCGGAA GCACCCAAAC CGCCGGCAAC GAAACCCTTG AGCCGCCTGG AGCAACTGCG GTTAGAGCAG CAGCAGAAGG CCGCTGCGGG GCAGGCCCCT TAA
|
Protein sequence | MMKFWFARNL SIACLLMGLA TAGHVLGADP VVRNVMPRGA QRGTEVELSF NGERLGDAAE VIMYEPGIEV LDFKVENDKL VKARVKLSSD QTPGIRHLRL RTKSGMSKTQ NFAISALPVV EEVEPNNEFA KPQVISNNVT INGVVTNEDV DYFVVDAKAG ERLTAEVVGI RLGNSMFDPY VSIINESRFE LAGSDDAAFG TQDGVASIVV PTDGKYILMV RESSYGGSGD SYYQLHIGNY PRPLAIVPAG GKPGSTVSVT YYGDVKGPLT RDVVLPTLES LPASSPLNFA LSASDDSGTS PTGNAFRLTD LENVIEAEPN DSMEQAPLAV LPAAMNGILQ TEGDRDLFAF EAKKGENFEF VVYGRRLRSE IDSVLQIWND KGNAVANSDD SPGTPDSQLR FNCPADGKYF VMIRDHLGRG GNAYHYRIEA NPITPRLDFS INEFVQFQED TLELPAGGRL PFLVTATRRD VGGPIEFRSE NLPQGVTIEA PQLADGQGVA QVVLVAAPDA PLSLKMSQIV GFIAADPNRH VESRVRQDAI MVRGQNNRPF FIEALPSLGV SVVEPVPFSV EIVQPKVPLI KNSPLKLKLI AKREGDFKGP INVELLQNPP GVNSSRNAVI AEGQTETVID VNAAGNAPAG DWKICARVRA DVGGSRVSAS PFVALKVAEP YVKLEFAKSA IEQNAEIDYP VKVEQVTPFE GTAKVVLMGL PHQTTAEPLE MTKETQELVF KIKAGPEAPV SKNKNLFCQI IIQQEGEEVI HHLGSGELRI DKPLPPKTTP APAPTPQVAE APKPPATKPL SRLEQLRLEQ QQKAAAGQAP
|
| |