Gene Plim_1449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1449 
Symbol 
ID9138145 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp1865244 
End bp1867706 
Gene Length2463 bp 
Protein Length820 aa 
Translation table11 
GC content53% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003629482 
Protein GI296121704 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.669353 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAAAT TCTGGTTCGC TCGCAACTTA AGTATTGCCT GCCTGCTGAT GGGCCTTGCG 
ACCGCTGGAC ATGTTCTGGG TGCCGACCCT GTTGTAAGAA ATGTCATGCC TCGTGGTGCA
CAACGAGGGA CAGAAGTCGA ACTCTCATTC AACGGCGAGC GGCTCGGCGA CGCTGCTGAA
GTGATCATGT ACGAGCCGGG AATTGAAGTC CTCGATTTCA AAGTCGAGAA CGACAAACTC
GTCAAGGCAC GCGTCAAACT CAGTTCAGAT CAGACGCCAG GGATTCGGCA TCTAAGGCTC
CGTACCAAAA GTGGCATGTC CAAGACGCAA AATTTCGCCA TCTCGGCCTT GCCTGTTGTT
GAAGAAGTTG AACCGAACAA TGAGTTCGCT AAGCCACAGG TGATTTCGAA CAACGTGACA
ATCAACGGCG TCGTAACGAA CGAGGATGTC GATTACTTTG TCGTCGATGC GAAAGCTGGT
GAGCGGTTGA CTGCGGAAGT TGTCGGCATC CGCCTGGGTA ACTCGATGTT CGATCCGTAT
GTGTCGATCA TCAATGAATC ACGATTTGAA CTGGCTGGCA GTGATGATGC GGCTTTTGGC
ACTCAGGATG GCGTGGCTTC GATAGTCGTC CCCACTGATG GTAAATACAT CCTGATGGTC
AGAGAGTCGA GTTATGGCGG GTCGGGTGAT AGCTATTACC AGCTCCATAT AGGAAACTAT
CCCAGGCCAC TGGCAATTGT CCCAGCCGGT GGTAAACCTG GAAGCACCGT TTCGGTCACT
TATTACGGGG ATGTCAAGGG CCCTTTGACG CGAGATGTAG TGCTACCAAC TCTGGAAAGT
CTTCCAGCAT CTTCCCCGTT GAACTTTGCC CTTTCAGCGA GTGATGATTC GGGAACTTCG
CCTACTGGTA ACGCATTTCG GCTGACAGAT CTTGAGAATG TGATCGAAGC GGAGCCGAAT
GATTCGATGG AGCAGGCTCC TTTGGCTGTC CTGCCCGCCG CAATGAATGG CATTCTGCAA
ACGGAGGGCG ATCGAGACCT GTTCGCCTTC GAAGCCAAAA AAGGCGAGAA TTTCGAGTTC
GTTGTTTACG GAAGACGATT GCGTTCCGAG ATTGATTCTG TGCTGCAGAT CTGGAATGAC
AAAGGGAATG CAGTCGCCAA TAGCGACGAC TCCCCCGGCA CTCCCGATAG TCAGCTTCGG
TTCAATTGCC CTGCGGATGG TAAATACTTT GTCATGATTC GCGATCATCT GGGTCGTGGA
GGGAATGCCT ATCATTACCG GATTGAAGCA AACCCGATTA CGCCTCGTCT CGATTTTTCG
ATTAATGAAT TTGTCCAGTT TCAGGAAGAT ACGCTCGAGT TACCCGCTGG TGGGCGATTG
CCATTCCTGG TAACAGCCAC AAGACGGGAT GTCGGCGGGC CCATTGAGTT TCGCAGTGAA
AATCTTCCTC AGGGCGTCAC GATCGAGGCT CCTCAACTGG CGGATGGCCA AGGGGTGGCT
CAGGTCGTCT TGGTCGCAGC TCCTGATGCA CCGCTGAGTC TGAAAATGTC TCAGATTGTG
GGTTTCATCG CCGCAGATCC CAATCGGCAT GTTGAAAGTC GAGTGAGGCA GGACGCCATC
ATGGTCCGCG GCCAGAACAA CCGTCCGTTC TTTATCGAAG CGCTACCTTC CTTGGGAGTT
TCCGTGGTGG AACCAGTCCC TTTTTCCGTG GAAATTGTTC AACCCAAAGT CCCGCTGATT
AAAAACAGTC CTTTGAAGTT AAAGCTGATT GCCAAACGAG AAGGCGACTT CAAAGGTCCC
ATCAATGTCG AGTTGCTGCA GAATCCACCA GGTGTCAATT CAAGTCGCAA TGCAGTCATC
GCTGAAGGGC AGACGGAGAC CGTGATTGAC GTGAATGCTG CTGGAAATGC TCCCGCAGGT
GATTGGAAGA TTTGTGCCCG AGTTCGTGCG GATGTGGGAG GAAGTCGTGT TTCCGCCTCG
CCGTTTGTTG CGCTGAAAGT CGCTGAGCCT TACGTCAAGC TGGAGTTCGC AAAGTCCGCT
ATCGAGCAGA ATGCAGAAAT CGATTACCCG GTAAAAGTTG AGCAGGTCAC ACCGTTTGAG
GGGACTGCCA AGGTCGTGTT GATGGGGTTG CCTCATCAAA CAACCGCCGA GCCACTGGAG
ATGACTAAAG AGACGCAGGA GTTGGTATTC AAGATTAAAG CCGGACCTGA AGCACCAGTC
AGCAAAAACA AGAATCTTTT CTGCCAGATT ATCATTCAGC AGGAAGGTGA AGAAGTGATT
CATCATTTAG GGAGCGGCGA ACTGCGGATT GACAAGCCGT TGCCACCCAA AACGACGCCT
GCACCCGCTC CCACTCCTCA AGTTGCGGAA GCACCCAAAC CGCCGGCAAC GAAACCCTTG
AGCCGCCTGG AGCAACTGCG GTTAGAGCAG CAGCAGAAGG CCGCTGCGGG GCAGGCCCCT
TAA
 
Protein sequence
MMKFWFARNL SIACLLMGLA TAGHVLGADP VVRNVMPRGA QRGTEVELSF NGERLGDAAE 
VIMYEPGIEV LDFKVENDKL VKARVKLSSD QTPGIRHLRL RTKSGMSKTQ NFAISALPVV
EEVEPNNEFA KPQVISNNVT INGVVTNEDV DYFVVDAKAG ERLTAEVVGI RLGNSMFDPY
VSIINESRFE LAGSDDAAFG TQDGVASIVV PTDGKYILMV RESSYGGSGD SYYQLHIGNY
PRPLAIVPAG GKPGSTVSVT YYGDVKGPLT RDVVLPTLES LPASSPLNFA LSASDDSGTS
PTGNAFRLTD LENVIEAEPN DSMEQAPLAV LPAAMNGILQ TEGDRDLFAF EAKKGENFEF
VVYGRRLRSE IDSVLQIWND KGNAVANSDD SPGTPDSQLR FNCPADGKYF VMIRDHLGRG
GNAYHYRIEA NPITPRLDFS INEFVQFQED TLELPAGGRL PFLVTATRRD VGGPIEFRSE
NLPQGVTIEA PQLADGQGVA QVVLVAAPDA PLSLKMSQIV GFIAADPNRH VESRVRQDAI
MVRGQNNRPF FIEALPSLGV SVVEPVPFSV EIVQPKVPLI KNSPLKLKLI AKREGDFKGP
INVELLQNPP GVNSSRNAVI AEGQTETVID VNAAGNAPAG DWKICARVRA DVGGSRVSAS
PFVALKVAEP YVKLEFAKSA IEQNAEIDYP VKVEQVTPFE GTAKVVLMGL PHQTTAEPLE
MTKETQELVF KIKAGPEAPV SKNKNLFCQI IIQQEGEEVI HHLGSGELRI DKPLPPKTTP
APAPTPQVAE APKPPATKPL SRLEQLRLEQ QQKAAAGQAP