Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_1398 |
Symbol | |
ID | 9138093 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 1778889 |
End bp | 1779875 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | glycoside hydrolase family 16 |
Protein accession | YP_003629431 |
Protein GI | 296121653 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACTCCA TTGCACGTCC TTTCTTTCAG ATCCTGGCCG TTGGAATCAC CCTTTCAACC ATCGGTGGAT TATCTCCCGG ACGAAATCAA GCGGCAGAGC CAACCAGCGA GTGGAAGCTC ACGTGGAGCG ACGAGTTTGC TGGCAGTGAG ATTGATCGTA AGAAATGGGA TTTCGATCTC GGGAACGGCT TCTACAACTA CCATTCCAAC CAATGGATCA GTGGTTGGGG TAACAACGAA CTGCAGTATT ACACCAAAGA ACCAGAGAAT GCGTTCATTC GCGACGGCAT GCTGCATATT CGAGCGGTCA AGGAATCGTA TCAGGGATGT GGCTATACAT CCGCCAAGCT GAAGACACGC CAGCGGGATG GTTCTCCGCT CTTCAACCAG AAGTATGGCA AATTTGAATT TCGAGCCAAG TTACCCACCG AGAAAGGTGT CTGGCCCGCT CTCTGGATGC TGCCACAGGG CGATTCCTAT GGGCCCTGGG CAGCCTCTGG CGAGATCGAC GTCATGGAAG CTCGCGGACA GGAACCTGGA AAAGTCTTAG GGACAGTACA CTACGGCGGC AGATGGCCTC AGAATGCCCA TAGCGGAGAT GAGTTTATCT TTCCGGCAGG GACATCGATG GCTGACTTTC ACACCTACGC GGTCGAATGG GAACCGGGAA AGATCAGTTG GCTGGTCGAT GGAAAGGTTT ATCAAACTCA AAACTTCTGG TGGAGTACCA GTGGTGTTCA AGGCACTTCT GGACAGGGGA AGAAGCCAGC CGGAGAACAG GATCTGAATC CGTGGCCAGC CCCGTTTGAC CAGCCGTTTT ATCTGATCAT GAACGTGGCC GTGGGAGGGA ATTTTCTGGG CCCACCCGAT GAGAAATCCC AGTTTCCTGC AGAGATGATT GTGGACTATG TGCGTGTCTA CAGTTCGACA AAGCCTGCCT CGATCGTTCC GCCCCGAGGC GAAGGAAAAT TGCCATTCCA GCCTTGA
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Protein sequence | MNSIARPFFQ ILAVGITLST IGGLSPGRNQ AAEPTSEWKL TWSDEFAGSE IDRKKWDFDL GNGFYNYHSN QWISGWGNNE LQYYTKEPEN AFIRDGMLHI RAVKESYQGC GYTSAKLKTR QRDGSPLFNQ KYGKFEFRAK LPTEKGVWPA LWMLPQGDSY GPWAASGEID VMEARGQEPG KVLGTVHYGG RWPQNAHSGD EFIFPAGTSM ADFHTYAVEW EPGKISWLVD GKVYQTQNFW WSTSGVQGTS GQGKKPAGEQ DLNPWPAPFD QPFYLIMNVA VGGNFLGPPD EKSQFPAEMI VDYVRVYSST KPASIVPPRG EGKLPFQP
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