Gene Plim_1324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1324 
Symbol 
ID9138018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp1689942 
End bp1691105 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content55% 
IMG OID 
Productphosphoribosylaminoimidazole carboxylase, ATPase subunit 
Protein accessionYP_003629357 
Protein GI296121579 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGCAT CGCCGACGAC GACAATCATT CAGCCGGGCT CTATCCTGGG AGTCCTCGGC 
AGCGGGCAAC TCGGACGAAT GTTTGCCATC GCTGCTCGTC GGCTGGGTTA TCGAGTGCAT
GTCTACTCTC CCGATGATGA CACGCCGACT GGCCAGGTGG CTGATCTGGA AATTCAAGGA
GCTTACGAAG ATCTCGACGC GGTCGCTGCG TTCGCGCGTG GTGTTTCGGT GGTCACGTTT
GAGTTTGAAA ATGTTCCATC GGCTACGACG GCTGCCATTG ACCAGATCTG TCCAGTCAGA
CCCGGTGGCC ATGTCCTGCA CACCACCCAG CATCGCCTGA GGGAGAAATC GTTCTTTGCC
TCACGCGGGT TGCCAGTCAC GCCTTTTCGA GCAGTTCGTT CTTTAGTGGA TCTGGAACAA
GCGGCTGTTG AACTGGGGCT ACCAGCGGTT CTGAAGACTG CATCATGGGG TTACGATGGT
AAAGGGCAGG TGATTCTGCG ACAGCAATCC GATTTGCCCA AAGCCTGGGA ATCGCTGAAG
ACTGACGAAG GGATTCTCGA AGCGTTTATC GATTACCAAT GTGAAGCCTC TGTCATCGTC
GCCCGAGGAC TCAATGGTGA AATGGCCATT TATGGCCCGC TACGAAACGA GCACCATCAT
CACATCCTGG ATATCACCAC TTTCCCTTCG GCTCTCTCGG AAAAGATCGA AAAGGCCGCG
ATTGAGGTGG CCGTGCAGGC GACTCTGGCT CTGGATGTCG TTGGAATTCT TTGTATTGAA
TTTTTCATCA CCAAGACGGG TGATGTGTTA ATTAATGAGG TGGCACCCAG GCCGCATAAC
TCGGGTCATT TAACCATCGA CGGGCATGTG ACGTGCCAGT TTGAACAACA GGTGCGGGCC
ATTTGTGGTC TCCCTCTGGG GTCGAGTGCA TCGCACGGCC CGTGTGCCAT GGCGAATCTG
CTGGGTGATG TCTGGGTCGA GGCCAAGGGA ACCCCTCGCT GGGAAAAAGC TCTGGCTAAC
CACACCATCA AGCTGCATCT TTACGGCAAA GAAGCAGCTC GAATGGGCCG CAAAATGGGC
CATCTCACGA CTGTAGGTAC TTCCGTTGCC GAAGCTCGGC AAGCTGTCAT CACAGCCCGG
CAGAATCTGA TGACAAAAGA TTGA
 
Protein sequence
MSASPTTTII QPGSILGVLG SGQLGRMFAI AARRLGYRVH VYSPDDDTPT GQVADLEIQG 
AYEDLDAVAA FARGVSVVTF EFENVPSATT AAIDQICPVR PGGHVLHTTQ HRLREKSFFA
SRGLPVTPFR AVRSLVDLEQ AAVELGLPAV LKTASWGYDG KGQVILRQQS DLPKAWESLK
TDEGILEAFI DYQCEASVIV ARGLNGEMAI YGPLRNEHHH HILDITTFPS ALSEKIEKAA
IEVAVQATLA LDVVGILCIE FFITKTGDVL INEVAPRPHN SGHLTIDGHV TCQFEQQVRA
ICGLPLGSSA SHGPCAMANL LGDVWVEAKG TPRWEKALAN HTIKLHLYGK EAARMGRKMG
HLTTVGTSVA EARQAVITAR QNLMTKD