| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_1210 |
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| Symbol | |
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| ID | 9137898 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | + |
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| Start bp | 1548361 |
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| End bp | 1550214 |
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| Gene Length | 1854 bp |
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| Protein Length | 617 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | conserved repeat domain protein |
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| Protein accession | YP_003629244 |
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| Protein GI | 296121466 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.2077 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTAGAA GAGTGTGGGT TCTCGCTATG TCTGCAGCGG CTGCACTCGC TCCCAGCCTG
TGCCCGGCTG CTGAAACTTC AACAACCAAG CCAGCCGGAC GGATTGCTGC GACACCATCG
GCCGATGTGC CGACGAAGTA CTCGCGAACT CAGCCTGCAC AGGCCGGGGC TGGTACTAGC
AGCACCAGTT CTAGCAAATA TAGTGAGCTA TTTGGTGAAG CTCCCAAGGC GACGCCTGTT
AAAGATAGTA AAGTCACTGG AGCTTCAGCC AAATCCGCAG CACCTGATAA AACCGGTGCG
ATGCGTGCCG GTGGAGAGCG AACCGCTGCC TGGAGCAGTG AGACCGATAA CGACGCTCCA
TTAGGTACAG CGGCCTTCAA GAAGGCCGAA GGGAATAACA GTTTTATTCA GCCTGTGCGT
CATACAGAAG AACGAGCCGC GAGCAGCACT CCTAAAGCGA ACAGCACCTC TCGCGTCGAT
CTTGCTCCAC AGATTCCTTC ACTGAATGTG GAGTGGGTCC GCAGATCCGA TATCAACGTC
GGTCAAGAAT GCACGGTCGA TCTGATTGTT CGCAACACGG GGACAACGAC AGCGTCAAAA
GTTTCGGTTG ATGGCTTTTT CCCGACAACC GTTCGCTTGA CCAGTGCTGT GCCAAAACCA
GCGACCATTA CCGATCATCT CACTTGGAAC ATCGAAGCGA TTCCTGCCGG TAGTGAGTAC
AAAGTTACCA TCAAGATGAT TCCCAGCCGT CGTGGCGAGC TCGCAACGAA CGCCACTGTC
CGCCTGACAG GTTCGGCTTC CGCTGCCTTC CGCGTGGAAG AGCCTTTGCT CAAGGTCGCA
CTCAAGGGGC CATCAGACAT CATGGTCGGT GATCCTGCAT CACAGACAGT GGTGATTTCT
AACCCTGGCA GCGGTATTGC TCACGATGTC AAGCTCGACG TCACGTTGAG CGAAGGGCTC
GAATGCAGCA AGGGTAGTCA GTTTGTCATG GATGTGGGTT CGATCAATGC GGGTGAATCT
CAGACGATTC GACTCCCTGT GGCTGCTGTC AAAGGTGGCC GTCAAACTGT GACGGTCGTT
GCCACCAGCA CCTCGGATGC AGGTCATACC GCATCGTCTG TCATCAATGT TCTCGCACCT
GCACTTCAGG TCGCCATCGA GGGGCCTGGC TTGCGATACA AAGGTCGTAA TGCCAAGTAT
GTCGTGACAG TCAAGAACGA CGGAAGTGTC CCGACCACCA ATGTACGTGT CACTCAGAAT
GTGGCTGAAG GCTTTGAATT TGTATCGGCA GATAAGGGTG GAAAGTTCGA TTCCAGCCGC
AATCAGGTTT CCTGGCTCGT GAGTCGGATT GAGCCGAATC AATCTGTCAA TCTGATCTGC
GAATTGACTG CCAATGCTCT GGGTTCGTTT GCCATTACCG CTCAGGCTGC CAACGACACC
GCCTCCATGG TGGAAGCCTC AACAACAACG AACGTCGAAG GTTCTTCAGC ACTCTCGATG
AAGGTGATCG ATCTGGATGA TCCTGTCGAA GTGGGTGGCG AAACAGCCTA CGAAATTCGA
GTTTCCAACG AAGGGACCAA GGCCGCGACA GGTGTCACTG TCACTTGTGA TCTGCCCGCC
GGTCTGGAAT TGATCAATGC CCGGGGTGCG ACAGAAGGCA TCAGCGATGG TCGCATCGTC
GGCTTCAAAC CACTGGCCAG TCTGGCTCCA GGAACCGAAG CGATCTTCCG AGTTCATGTT
CGCAGCACAC AGGAAGGGAA TCTCCGCTTC CGGGCCCGCG TCACCAGCAA CTCGATCGAA
GAACCACTGC TGATCGAAGA ACAAACCAAG TTCTACTCAG ACGTTCGTCG CTAA
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| Protein sequence | MPRRVWVLAM SAAAALAPSL CPAAETSTTK PAGRIAATPS ADVPTKYSRT QPAQAGAGTS
STSSSKYSEL FGEAPKATPV KDSKVTGASA KSAAPDKTGA MRAGGERTAA WSSETDNDAP
LGTAAFKKAE GNNSFIQPVR HTEERAASST PKANSTSRVD LAPQIPSLNV EWVRRSDINV
GQECTVDLIV RNTGTTTASK VSVDGFFPTT VRLTSAVPKP ATITDHLTWN IEAIPAGSEY
KVTIKMIPSR RGELATNATV RLTGSASAAF RVEEPLLKVA LKGPSDIMVG DPASQTVVIS
NPGSGIAHDV KLDVTLSEGL ECSKGSQFVM DVGSINAGES QTIRLPVAAV KGGRQTVTVV
ATSTSDAGHT ASSVINVLAP ALQVAIEGPG LRYKGRNAKY VVTVKNDGSV PTTNVRVTQN
VAEGFEFVSA DKGGKFDSSR NQVSWLVSRI EPNQSVNLIC ELTANALGSF AITAQAANDT
ASMVEASTTT NVEGSSALSM KVIDLDDPVE VGGETAYEIR VSNEGTKAAT GVTVTCDLPA
GLELINARGA TEGISDGRIV GFKPLASLAP GTEAIFRVHV RSTQEGNLRF RARVTSNSIE
EPLLIEEQTK FYSDVRR
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