Gene Plim_1083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1083 
Symbol 
ID9137769 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp1379538 
End bp1380545 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content52% 
IMG OID 
ProductUncharacterized membrane-anchored protein-like protein 
Protein accessionYP_003629119 
Protein GI296121341 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGCAGC ATCGATTCTG GTTCACGGTC GTTTGCATTT TGGTGTTCAG TGGCCTCCCG 
GAAAGACTGA TTGCCGCTCC GGCCGATCCT CCACTGACTC CCGAGCAGCG TCGAATCCTC
GAACGATTCC AACAGATTTC CTGGCAAAAG GGGCCCGGCC GATTCGCAGT TGGGCCACAA
GCCACCATTC AGATCCCTGA CGGATTTCAG ATCACCAATT CAGCCGGTGC TCAGATCTAC
ATGGAGTTAA GTGGTAACCC GCCATCCGCA AACATTCAGA GTGTGGTAAC ATTTACAGAG
GAGCCATTTG GATTTTACCT GATTTTCTCT TATGAGGACT CGGGGAAAGT CGATGATCGT
GATGCGAGTA ATCTCAATGC GGATGAGCTC CTCAAGCAGC TTCGCGAGAA TACGAATGCT
GGAAACGCTC ATCGCAAACA ACTGGGACTA GAGCCACTCT ACATTGATCG CTGGATCATT
CCTCCGCGTT ACAACTCCAC TACGAAGCAA TTGGAATGGG CACTTCGCGG GCATTCGGAA
AGTGGGAATC CCGTCGCCAA TTGGGATACC AGGATCTTGG GACGCTACGG CATGATGTCC
GTCAAGCTGG TGATGACAAA TCCAGACGAA ATTGAGTCTG TAATTCCCGG CGTTAATCAG
CTGCTGCAAG GCTTTTCATT CAATGCTGGA AGTGATTACG CATCGTGGCA ACCCGGAGAC
AAAGTGGCCG CACTGGGTGT GACCGCATTG GTGGCTGGAT CCACAACCGC GGTCGCTGCC
AAACTGGGAT TCTTTCAGAA AATGGGTGTC TTTATTTTTA AATACATCTA TCTGATTCTG
GCAGCTTTGG GGGCCGTCGG AGCGCGCTTC CTTGGGAAAT CCGCATCCAA CTCGTCTCCT
TCAGATTCAG TCGCGATGAA TCGCGACTCG GCTCTTCCTC GTCCCCCGAC ACTTCCAGGA
CCACGTCCCC GAACGCCCCA GTCTCCCGAC AATCAGTCAA GTGATTGA
 
Protein sequence
MLQHRFWFTV VCILVFSGLP ERLIAAPADP PLTPEQRRIL ERFQQISWQK GPGRFAVGPQ 
ATIQIPDGFQ ITNSAGAQIY MELSGNPPSA NIQSVVTFTE EPFGFYLIFS YEDSGKVDDR
DASNLNADEL LKQLRENTNA GNAHRKQLGL EPLYIDRWII PPRYNSTTKQ LEWALRGHSE
SGNPVANWDT RILGRYGMMS VKLVMTNPDE IESVIPGVNQ LLQGFSFNAG SDYASWQPGD
KVAALGVTAL VAGSTTAVAA KLGFFQKMGV FIFKYIYLIL AALGAVGARF LGKSASNSSP
SDSVAMNRDS ALPRPPTLPG PRPRTPQSPD NQSSD