Gene Plim_0902 details

Gene Information

• Locus tag: Plim_0902
• ID: 9137587
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: -
• Start bp: 1153250
• End bp: 1156669
• Gene Length: 3420 bp
• Protein Length: 1139 aa
• Translation table: 11
• GC content: 56%
• Product: heme-binding protein
• Protein accession: YP_003628945
• Protein GI: 296121167

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCTTGA AATCGATGAT GACTTGGAAT TTCTGGCAGA GCCGCAGAGC CATCACTTCG 
CTGGCGGTAT TCGCTGCTGC CAGCCTGGGT GGGGCAATCC TCACAGAGAG TCTTTCGCTC 
GAATCGCTCA CTGGCATGCC TCAGGTACTG GCGCAAGCTC CGGATAAAGC ACTGGCCGAA 
AAACTACTGG CGGTTCCTCC GCGTCCCAAG CGGCCAGATC TTCCCGTCAG CAAAGTGCCA 
CTGGAGTTCA TCGAGGGTGA GCGCATTGCC TTTCTGGGGA ACAGCTTTGC CGAACGCATG 
AATCTGTTTG GCAATTTCGA GACGCTGCTG CACAGCAAGT TTCCAGAAAA GAAGCTGGTG 
ATTCGCAACT TTGGCCGCCC GGCGGAAGAA GTTTCGATTC ATCAGCGCTC GAGCGATTAC 
ACCAATCTCG ATGATCCTCA AAAAGCTTTC GGTGCAGATA CTTACATCTG CTTCTTTGGT 
TTTAATGAAT CGTATGCAGG CCCGGCAGGG GTCGAAAAGT TTAAGCAGGA TTACGAGAAG 
TTCATTAAGG AAACCACTCA GCGATATCCT CGCGACGATG CCAAGTCGCC CCCTCGATTT 
GTGCTGGTGA CACCCCTGGC CTTCGAAGTT TCTGGAGAGC CGCTGCTTCC GAAAGGCGAC 
GCCGAAAACT CGAACCTCGC CCTCTATGCC CAGGCGGTTC GCGATGTCGC TGCCCAGAAC 
AAGCTCGCCT GCATCGATGT CTTCGCTGGT TCCAAGGCCT TGTTCGATGC TCAAACAGGT 
CTGCAGCACA CGATCAATGG CTGCCACTTG AACGAAGAGG GTGATCTGGC GGTTGCCAAG 
CTCCTCTTTG CCAGTGCGTT CGGCCAGTCC GCATTGGGTC AACTCAGCTC GATCAATCAG 
GAGTTGCGCA GTGCTGTTAA CGATAAATCG TGGATCCACC TGCAAGACTA CCGCATGCTC 
AATGGCTGGT ATGTTTACGG TGGCCGCCGG ACCTGGGATA CAGAAACATT CCCGCGCGAA 
TATGTGAAGA TCCGCAATAT GGCCGCAGTG CGTGATCAGT ACATCTGGGA TCTGGCCAGT 
GGCAAACCCG CCTCGAAGCC CAATGACGAC AACACGGGGG AACTGATCGT TCCACCCACC 
CGCTTCGGCA ATCCCCGGCA AGCCTACTCC GAAGCGACCG AGTTGCGTTA CCTGACACCT 
GAGCAACTGA TCGCACAGAC CAAGGTTCCC GAAGGCTTTG AAATCAAGGC TTTTGCTGAT 
GAAACGATGT TCCCGGAACT CGCCAAGCCA GTGCAACTGA ACTTCGACAA CAAAGGTCGG 
CTGTGGGTCT CCTGTATGCC CACTTATCCC CAGTGGCAGC CTGGCGACGC GAAGCCAAAT 
GACCGCCTGA TCATTCTGGA AGATGCCAAT CAGGATGGCA AAGCTGATAA ATGCACCGTT 
TTCTACGACA AGCTCCATTG CCCCACAGGT TTCGAGTTCT GGAATGGTGG CGTGCTGGTT 
GTCGATCAGC CTCGACTGTT GTGGCTCAAG GATACAGATG GTGATGATAA GGCCGATGTG 
GTCGTGCATC TCATCGATGG CTGGGCCACT GATGATACTC ACCACACCTG CAGTGCCTTC 
GAGTGGTCGA ATAGCGGCCT GCTCCACATG CTCGAAGGGA TTGCGACCAG TACAACCTTG 
GAAACACCCT GGGGCCCGCA TCGCAGTCAG GGGAATGGTG GCGCGTATGT TTTCGACCCC 
AGGTCGCAAA AGATGCGCCA GTTCGCACTC CCCGGCCAGT ACAACATGTG GTGCTATGTC 
TTCGATGAAT GGGGCCAGGG GATTGTGGGC GATGGCACAA CCGCCAACCA CGCGTGGGAT 
ACCCCCCTTT CCGGTGCTCA GTTCCGCGGT CGAACCGGCC TCAATATGGT CTTCAATCAG 
GAAGGGATGC GACCGGCTCT GGGATGCGAA TGGCTCGTCA GCCGACAGTT CCCGGAAAGC 
GTCCAGAAGC AGTTCACCTA TGCCTGCGTG ATCAACATGA ACGGCATGCC CCGCTTCACC 
ATCAACGATG ATGGCGGTGG ATTCGCAGGC AAGAGAATGA AACTGACTGA TGGAAAACCC 
GACGACCTGA TTGCCTCCAC CGATAAGCAC TTCCGCCCGG CAGATCCTCA AATTGGCCCG 
GATGGTGCCT TGTGGTTTGG TGACTGGGCC AACGCGCTCA TTGGTCACAT GCAGTATTCG 
CAGCGCGATC CGAATCGCGA TCATACCCGC GGTCGCATTT ATCGCCTGGT GGCGAAGGAT 
CGTCCCCTGC TGACTCCTGT GACACAGCAT GGCAAGTCGA TTGAAGAACT CCTTGATCAG 
ACCAAAGTCT ACGAGTGGCG GACCCGCTAC CGCGCCCGTA ATGAACTCAA TAGCAGACCG 
ACCCAGCAGG TAGTTGACGG CGTGAAGGCC TGGCTCGCCA AGCTCGATCC GAAGTCTGAG 
GATTATCCTC GCCTGCAATG CGAAGCCATG TGGGTGCTGG CCAGTCATCA TCAGCATGAT 
CCAGCCTTGA TTCAGGCTCT GTTGGCTTCG CCTCATCCCA ACGCGCGGGC TGCTGCTGTA 
CACATTGTGG CTGATTACCG TGACGAGCTT CCCGATGCGT TGTCCTTGCT GATCACTGCT 
TCCCGCGATG AACATCCCCG CGTTCGCACG GAAGCAGCTC GCGGACTGAG CTACTACGAT 
GATCCTGCTG CTTCGCAGGC CGTGCTGGCG ATGACTGAAA AGCCAGCCGA TTACTGGGCG 
GACTACACCA TCCGCCATGC ACTCGCTGCC CACGAACCAC TGTGGCGTGC GGATTACCTG 
ACGGGGAAGA TTCCTGCACC ACCTCGCTCG AAAGAGATTG TGACACAGAT TCTTTCCGCG 
TCGAAATCAG GGGCAGCTGC TTTGCCGTTC ATCACGACAT TGCTCAGTGC GGAACCCAAG 
CCTGAAGAAG AGCGAAATAA AGCGATGACG GGGCTGGCTG ATCTTTCGGG AGATACCAAC 
CGCGGCCGCG AGATTTTCGT TCGCAACTGC ACTTCGTGTC ACAAGGTCGG AAATGGCGAA 
GGCCGGGAGT ATGGCCCGAA CCTCGCGGGC GTGGCCAAAC GCTTGAAGCC CATCAAGATC 
GTCGAATCGA TTATCGATCC GAATGCGGAA GTCGATCCCA AGTATCGGGC GACGCTGCTG 
ATTACTGCCG ACGGTGTGGC GGTTTCAGGC CTGCTGGTGA AGGAAGACGA CACCACCATC 
GAGATTTTCG ATGGCAAGAT TGTCCGCAAG ATTGCAAAGG CGGATGTCGA AGAGCGGGCT 
GTCCAGAAGA TGAGCAGCAT GCCAGAAGGG ACTGCTTCGT CAATCGCTCC TTCGGAACTG 
GTGGACCTGC TGACCTACCT GAAGGCCCAG AATCAGGATG TGAAGCCCGC CACCAACTGA 

 

Protein sequence

MTLKSMMTWN FWQSRRAITS LAVFAAASLG GAILTESLSL ESLTGMPQVL AQAPDKALAE 
KLLAVPPRPK RPDLPVSKVP LEFIEGERIA FLGNSFAERM NLFGNFETLL HSKFPEKKLV 
IRNFGRPAEE VSIHQRSSDY TNLDDPQKAF GADTYICFFG FNESYAGPAG VEKFKQDYEK 
FIKETTQRYP RDDAKSPPRF VLVTPLAFEV SGEPLLPKGD AENSNLALYA QAVRDVAAQN 
KLACIDVFAG SKALFDAQTG LQHTINGCHL NEEGDLAVAK LLFASAFGQS ALGQLSSINQ 
ELRSAVNDKS WIHLQDYRML NGWYVYGGRR TWDTETFPRE YVKIRNMAAV RDQYIWDLAS 
GKPASKPNDD NTGELIVPPT RFGNPRQAYS EATELRYLTP EQLIAQTKVP EGFEIKAFAD 
ETMFPELAKP VQLNFDNKGR LWVSCMPTYP QWQPGDAKPN DRLIILEDAN QDGKADKCTV 
FYDKLHCPTG FEFWNGGVLV VDQPRLLWLK DTDGDDKADV VVHLIDGWAT DDTHHTCSAF 
EWSNSGLLHM LEGIATSTTL ETPWGPHRSQ GNGGAYVFDP RSQKMRQFAL PGQYNMWCYV 
FDEWGQGIVG DGTTANHAWD TPLSGAQFRG RTGLNMVFNQ EGMRPALGCE WLVSRQFPES 
VQKQFTYACV INMNGMPRFT INDDGGGFAG KRMKLTDGKP DDLIASTDKH FRPADPQIGP 
DGALWFGDWA NALIGHMQYS QRDPNRDHTR GRIYRLVAKD RPLLTPVTQH GKSIEELLDQ 
TKVYEWRTRY RARNELNSRP TQQVVDGVKA WLAKLDPKSE DYPRLQCEAM WVLASHHQHD 
PALIQALLAS PHPNARAAAV HIVADYRDEL PDALSLLITA SRDEHPRVRT EAARGLSYYD 
DPAASQAVLA MTEKPADYWA DYTIRHALAA HEPLWRADYL TGKIPAPPRS KEIVTQILSA 
SKSGAAALPF ITTLLSAEPK PEEERNKAMT GLADLSGDTN RGREIFVRNC TSCHKVGNGE 
GREYGPNLAG VAKRLKPIKI VESIIDPNAE VDPKYRATLL ITADGVAVSG LLVKEDDTTI 
EIFDGKIVRK IAKADVEERA VQKMSSMPEG TASSIAPSEL VDLLTYLKAQ NQDVKPATN