Gene Plim_0891 details

Gene Information

• Locus tag: Plim_0891
• ID: 9137576
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: +
• Start bp: 1138764
• End bp: 1140815
• Gene Length: 2052 bp
• Protein Length: 683 aa
• Translation table: 11
• GC content: 55%
• Product: glycosyl transferase family 2
• Protein accession: YP_003628934
• Protein GI: 296121156

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAATGCCA GCAGCATCAC TCCTTTGAAG GTCTCACAGG TTTCTCAGCC GGGAAGTCGT 
CGCTTTCGAC TGTCGCTCGC TGTGCTCACT CTGACGACAA CCGCTTTTGC GATCTGGCTG 
TTTTTGTGGT CGTTGGGAGA TATTTCCAAG AATCCGGCAA CTTGGCTGCT GGTGCCTTTA 
TTTGCTCTGC TGGTGCTGAT CATTTCCTTC TCGTTCTGGA CCAGCACCCT CGGCTTGTGG 
CTGACAATTA CCCAGCGTCG CCAGTCAGCA TCGACTTCGC AGTCATCGCA CAGTTCTTTA 
CCAAGAACGG CGATCCTGAT GCCTGTTTAC AATGAAACTC CCGCCAGTGT GTTCGCGAAT 
GTCCAGGCGA TGATTGAATC GCTTGCCACC ACACCGCATG CGGCGGACTT TGACCTGTTT 
GTTCTGAGTG ATACGACGAA CCCGGATATC TGGCTGGAAG AGGAGCGGAT GTGGGGCCGC 
CTTTGTCAGC GACTGACCGG CCCGACCAAC GTTTTTTACC GCCGACGGCC GAAAAATACG 
GCACGCAAGG CGGGGAACAT TGCTGATTTC TGTGAACGCT GGGGCACACA ATACGATCTG 
ATGATTGTGC TCGATGCCGA CAGTGTGATG GATGGCCAGA CGATGGTCGA AATGGCCCGT 
CGCATGCAGG ATGACCCTGC CCTGGGAATT CTGCAGGTGC CACCTGTCCC TGTGAACCGG 
CTTTCATTTT TTGCACGACT GCAGCAGTTC TCAGCCAGAC TTTACAGCCC GGTCCATATG 
GAAGGCTTCA GTTCGTGGGC GAGCTTTGAC AGCAACTACT GGGGACATAA TGCGATTATC 
CGCGTGGCTC CTTTTATTGA TCACTGCGGG TTGCCCACAC TCCCGGGCGT GGCACCCCTA 
GGTGGCGAAA TTCTGAGCCA CGATTTTGTA GAAGCCGCTC TGATGGCACG CGGTGGCTGG 
AAAGTGGCTC TCGCGCACGA TCTGGCGGGG AGCTATGAAG AATGCCCCAC GACACTGCTG 
GATTATGCGA AGCGAGATCA GCGGTGGTGC CAGGGAAATC TGCAGCACAT GCGGCTGATT 
ATCAGCGAAG GTTTGAGGCC GATCAGCCGT CTGCATCTGG CCATGGGCGT GATGTCTTAT 
CTGGCATCGC CTCTGTGGCT GCTGTTTACG CTGCTGGGGC TCTTGGCCAT GGCGATCGAC 
GGGATCTGGC TGGGGAGTAC TCAAGAACGC ATCAGCGGGC TGGTGGTCTT TGCCTTCACC 
ATGTTTCTAC TCATGGCCCC GAAGGTCTGG AGTCTGGTGG CTTTGGCGTT TGATCGCCCG 
CGAAGAGAAC AGTTCGGTGG CTGGTCGAAG ATTATTCCCA GCGTGCTGAT CGAAACCGCC 
GCCTCAGTGC TCGTGGCGCC CATCATGATG CTGTTTCATA CACGATTTGT AATTTCCACC 
TTATTGGGCG AGAAAGTGCA GTGGAATGCC CAGAACCGGG GAGATGGTGA TATTGATTTT 
CTGGCGGCCT GCCGGGTTTT TGGCCCGCAT ACATTGACCG GGCTGGTGGG AAGTGCCTTG 
ATACTTTTCT TTGCTCCCGG CCTGTTTTTG TGGTTATCGC CCATTCTGCT GGGGTTATCG 
CTGACCATTC CTTTCTCGAG AATTCTGGGC AGTGTCGAAC TGGGGCAATG GCTCGCTCAT 
CGGCGACTGC TCCTGATTCC AGAAGAATCG GAACTCACAC CGATTCTCAA GCTGCAGCAG 
CGTGCTCTGG AACAGCATGA GCAATACGCG AATGCCCATG ATCGCAGCCA GTTACTCGGA 
GAGTTGCTTT CCGACCCGGG CTTTCAAGCA TTGCATGCTT CGATCCTGCA GCAGACAGCC 
GCTGGGCTCC CGGCTCCGGA AGCCAAAGTT CGCGAATGGA CTCAAGCCAT ACTTACTCAA 
GGGCCCGAGA GTTTGAGTGT CGAGGATCGC CGGCAGCTAT TACTCGATCG AGAGGCACTG 
CGTGAATTGC ATATTCAGTA TCGAGTGCGG CAATTACATC CCGATCAGGC AGCGACTGCT 
TCGCCTATGT AG 

 

Protein sequence

MNASSITPLK VSQVSQPGSR RFRLSLAVLT LTTTAFAIWL FLWSLGDISK NPATWLLVPL 
FALLVLIISF SFWTSTLGLW LTITQRRQSA STSQSSHSSL PRTAILMPVY NETPASVFAN 
VQAMIESLAT TPHAADFDLF VLSDTTNPDI WLEEERMWGR LCQRLTGPTN VFYRRRPKNT 
ARKAGNIADF CERWGTQYDL MIVLDADSVM DGQTMVEMAR RMQDDPALGI LQVPPVPVNR 
LSFFARLQQF SARLYSPVHM EGFSSWASFD SNYWGHNAII RVAPFIDHCG LPTLPGVAPL 
GGEILSHDFV EAALMARGGW KVALAHDLAG SYEECPTTLL DYAKRDQRWC QGNLQHMRLI 
ISEGLRPISR LHLAMGVMSY LASPLWLLFT LLGLLAMAID GIWLGSTQER ISGLVVFAFT 
MFLLMAPKVW SLVALAFDRP RREQFGGWSK IIPSVLIETA ASVLVAPIMM LFHTRFVIST 
LLGEKVQWNA QNRGDGDIDF LAACRVFGPH TLTGLVGSAL ILFFAPGLFL WLSPILLGLS 
LTIPFSRILG SVELGQWLAH RRLLLIPEES ELTPILKLQQ RALEQHEQYA NAHDRSQLLG 
ELLSDPGFQA LHASILQQTA AGLPAPEAKV REWTQAILTQ GPESLSVEDR RQLLLDREAL 
RELHIQYRVR QLHPDQAATA SPM