Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_0804 |
Symbol | |
ID | 9137488 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 1040078 |
End bp | 1040884 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | intradiol ring-cleavage dioxygenase |
Protein accession | YP_003628848 |
Protein GI | 296121070 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCTATC TTGTGAGTCG TCGGTCATTC TTAAGGGCCG CTGGCTTTGC TGCGGCAATC AACGTTTCTG GTGTTTTTGC AGAAGAGTTA ATGCGAACAC CGGCACTCAC GGAGGGGCCG TTTTATCCGG ATCATTTACC GCTGGATACC GATAACGATC TGCTCGTGGT GAATAACCAG ATCACTCCTG CTGTGGGCGA GATTACTCAT CTTTCGGGGA AATTGCTGAG TTCTACGGGT GAGCCCATCC GTAATGCGTT CATTGAGATC TGGCAGGTCG ATGGGAACGG GGCTTATCTG CATACCGGAG ACAGCCGGCA TGCCAGTTTT GACAAGAATT TTCAGGGATA TGGTCGCTTT CTGACAGCGA GTGACGGGAG CTATTACTTC CGCACGGTGA GGCCAGTTCC TTATCCTGGG CGAACTCCGC ACATTCACTT TGGTGTCAGT CTGGGTGGGA AGAGGGTGCT CACGACTCAA CTCCTGATAA AGGGACACCC GCAGAATGAG CGGGATGGTG TCTTTCGTGG ATTGAAGTCT GAAGCAGAGC GAAACCTGTT GCTGGCAGAT TTCGAGAAGA TCCCCAATTC GCCGATTGGT GAACTCGCGG CGAAGTTTGA CATGGTTCTG GGCCGGACAC CCGAAGACGA TCATCAGGTC CACGGGATTG CTAAATCGGA AATGGCATCC GGCGGTGGCC GCGGGCCGGG TGGCCCGCGT GGCGGTCGTC CACCCGGTGG TGCCGGTGGG CCAGGTGGAA GGCCGCAACG GCCCAATGTG CCACCTTCGG GTTCCACTGA AGAGTAA
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Protein sequence | MSYLVSRRSF LRAAGFAAAI NVSGVFAEEL MRTPALTEGP FYPDHLPLDT DNDLLVVNNQ ITPAVGEITH LSGKLLSSTG EPIRNAFIEI WQVDGNGAYL HTGDSRHASF DKNFQGYGRF LTASDGSYYF RTVRPVPYPG RTPHIHFGVS LGGKRVLTTQ LLIKGHPQNE RDGVFRGLKS EAERNLLLAD FEKIPNSPIG ELAAKFDMVL GRTPEDDHQV HGIAKSEMAS GGGRGPGGPR GGRPPGGAGG PGGRPQRPNV PPSGSTEE
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