Gene Plim_0776 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0776 
Symbol 
ID9137459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp1008151 
End bp1009617 
Gene Length1467 bp 
Protein Length488 aa 
Translation table11 
GC content55% 
IMG OID 
Productprotein of unknown function DUF1501 
Protein accessionYP_003628820 
Protein GI296121042 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCAGC CCATGCATAA TTTTTGTGGA CGCACTCGCC GGGAGTTTCT GTGGGAGGCT 
GGGGCTGGTT TTTCCGGCCT CGCCATGACA GGGCTCCTGC AGAAGGAAGG CTTCTTCGTG
AAGCAGGCGG TCGGTGCTGA TGGTGTCACC CCCTTTGTGA ATCCATTGGC TCCTAAAGAG
CCTCACCATG CTCCCAAAGC CAAAAGTGTG ATTTTTCTCT TCATGTACGG TGGCCCCAGC
CAGGTCGACA CCTTTGATTA CAAACCGAAA TTGTACGGGC TGGATGGCAA GACGATTCCC
GTCAAGACCA AGGGGCGCGG CGGGGCACGC AATGAAGGGC GCGTCGTCGG CCCCAAATGG
AATTTTCAGC AATATGGCCA ATCGGGGCAG TGGGTCTCAG ATCTCTTTCC GAATCTCGCG
ACCTGCGTGG ACGATATCGC ATTTATCAAG TCGATGACGG CTGAAGCGCC GGTGCATGGT
TCCGCCATGC TGCAGATGAA CTCGGGCAAA ATTCAAAGTG GTTATCCTTG CCTGGGTTCT
TGGGTCAATT ATGGCCTGGG GACAGAAAAC GAAAATCTGC CAGGTTTCGT GGTAATGCTC
GACCATTCGG GCGGGCCGAT CAGTGGTGCC AAAAACTGGT CCAGCGGCTT CATGCCGGCA
AGTTATCAGG CGACCGTGAT GAGATCAAAG GGCCCGGCCA TTCTCGATCT CGTGCCACCT
GAAAACATGT CCGATGACGT CCAGCGGCAA CTCATCTCCA CAATCAACGA GTACAACCAG
GAGCATCAAC TCTCGCGAGG TGAAAACTCG AATCTGGCAG CTCGTATTGC CAGTTTTGAG
CTGGCTTACA AGATGCAGAC CACAGCACCG GAAGCGACCG ATCTCTCGCA GGAAACGGAA
TCGACACTCA AGCTGTACGG GATGGATAAT CCGCAGACCG AATACTTCGG TCGGCAGTGC
TTGCTCGCTC GTCGCCTGGT AGAACGCGGA GTCCGGTTCA TTCAGGTTTA TGCTGGTGGC
AATCACAACG ACGCCAACTG GGATGCTCAC GGCGATCTGG TGAAGAATCA CACGTTACAC
GCCGGTCGAA CCGACAAGCC GATTGCCGGG CTATTAAAGG ATCTCAAGGC ACGGGGCTTG
CTCAATGATA CTCTGATTGT GTGGGGTGGT GAGTTTGGCA GGCAGCCAGT CGCTGAATAC
AAAGAGGGGA CTGGTCGAGA TCATAACGTA GCTGGCTTTA CCATGTGGTG TGCTGGTGGT
GGCATCAAGG GTGGATGCAG TGTCGGTGAG ACCGATGAAC TGGGGAATGA AGCCGTCAAG
GATCGTTTCC ACGTCAAGCA CCTGCATGCG ACGATTCTGC ATCAGTTGGG TCTCGATCCG
AATCACCTCT CCTTCTTTTA CGGCGGTCTC GATCAGAAAC TGGTGGGCGT CGAAGGAGCT
GATCCGATCA AGCAGATCAT TGCCTGA
 
Protein sequence
MNQPMHNFCG RTRREFLWEA GAGFSGLAMT GLLQKEGFFV KQAVGADGVT PFVNPLAPKE 
PHHAPKAKSV IFLFMYGGPS QVDTFDYKPK LYGLDGKTIP VKTKGRGGAR NEGRVVGPKW
NFQQYGQSGQ WVSDLFPNLA TCVDDIAFIK SMTAEAPVHG SAMLQMNSGK IQSGYPCLGS
WVNYGLGTEN ENLPGFVVML DHSGGPISGA KNWSSGFMPA SYQATVMRSK GPAILDLVPP
ENMSDDVQRQ LISTINEYNQ EHQLSRGENS NLAARIASFE LAYKMQTTAP EATDLSQETE
STLKLYGMDN PQTEYFGRQC LLARRLVERG VRFIQVYAGG NHNDANWDAH GDLVKNHTLH
AGRTDKPIAG LLKDLKARGL LNDTLIVWGG EFGRQPVAEY KEGTGRDHNV AGFTMWCAGG
GIKGGCSVGE TDELGNEAVK DRFHVKHLHA TILHQLGLDP NHLSFFYGGL DQKLVGVEGA
DPIKQIIA