Gene Plim_0700 details

Gene Information

• Locus tag: Plim_0700
• ID: 9137382
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: +
• Start bp: 919782
• End bp: 920336
• Gene Length: 555 bp
• Protein Length: 184 aa
• Translation table: 11
• GC content: 56%
• Product: RNA polymerase sigma factor, sigma-70 family
• Protein accession: YP_003628746
• Protein GI: 296120968

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTTGATG AATTGGAATT GTTGCAGTTA GTGGAATTGG CTCAATCAGG TGACCGGCAG 
GCTTTCGGTG TGCTCGCCCG GCAGTTCGAA TCGACGATTT TCGCGATTGC TTTGCGGCGA 
TTGCGAAATC GGACTGAAGC TGCCGAGCTG ACACAGGATG TCCTGGTTCA GGCCATGCGG 
AAGCTGCCTC AGTTGCGGGA ACCAGAACGG TTTGCCGGCT GGTTGCGGCG AATCACCGTG 
CGGATGGCCA TCAACCGGGT AGTCCGTCGC CCGAAGGAAA CGATCAGCAG CCCCGAAATC 
TTCGGAAACA TCCGGGGCGA AGGTCGGTCT CCGCTGGAGC ATGTTTTGAA GGGTGAAGCG 
GCGGGAGAGG TGAAGGCTGG GCTGCGAAAG CTGCGGGCAT TGGATCGAGC CACGTTGTTG 
GCCTTTTACT TTGAAGGTCA ATCACTGATC GAAATGAGCC AGCAGTTCCA GAGTCCGGTC 
GGCACTATCA AGCGCAGGCT CCACACAGCT CGTAACCGAT TGAAGGATGT GCTCACACAT 
CTTCAGCCGG CTTAA 

 

Protein sequence

MVDELELLQL VELAQSGDRQ AFGVLARQFE STIFAIALRR LRNRTEAAEL TQDVLVQAMR 
KLPQLREPER FAGWLRRITV RMAINRVVRR PKETISSPEI FGNIRGEGRS PLEHVLKGEA 
AGEVKAGLRK LRALDRATLL AFYFEGQSLI EMSQQFQSPV GTIKRRLHTA RNRLKDVLTH 
LQPA