Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_0540 |
Symbol | |
ID | 9137218 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 676867 |
End bp | 678684 |
Gene Length | 1818 bp |
Protein Length | 605 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | Serine/threonine protein kinase-related protein |
Protein accession | YP_003628587 |
Protein GI | 296120809 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCACTGG ATGACGAGTT CCTTGCAGTC GCGGTTCGGA ACGGTTTGTT GGAGCAAGTC GTTGCTGACC AGTTGGGAGC TTTGTCGGCA AGCTCTGGCA TCTCTTCGGC ACAAGCAGCA CTCAACGCCG GCCGACTTTC ACATGACCAG ATCGATGTCA TCGAAGCTCT GAGAAGTCCT TTGGATCAGA TTCCGGGTTA TGAGCTGCTG TCGCTCCTCG GACAGGGAGG CATGGGCGTC GTCTACAAGG CTCGGCAGTT AGCGTTCGAC CGCATCGTAG CCCTGAAGCT CGTGCGGAGC GGATCTGCTT CAAGTACGGC GGTCGCCCGC TTTGAAAATG AGATCCGCAC CATTGGCAGC TTTTCCCATC CGCATATCGT GACCGCCTTC GATTCGGGAA AGCATGCCGG TCGACTGTAT CTTGCCATGG AGTATCTTGA TGGCCAAGAC GCTGAGGTCT TCATCCCTAA GGAAAGGTTT CTCCCCGAAA GGATCGTCTG GGGGATGATC CGTCAGGTCG CGACAGGCTT GGCGTACGCC GCCGAGCGGG GAGTCACGCA TCGCGACATC AAACCGGCGA ACCTGTTGCT GGTGACGCCG CCGAGCGGAT ATCCCCTCCC TGAGGGTGTT CCGTTCGTCA AAATCGCGGA CTTCGGACTC GCCCTCCTGC AGGAGGATTT TGACGCGCAA ACCCGCCTGA CGAGGGAAAA CGCCGCCGTG GGCAGCCCAC ACTACATGTC TCCCGAACAA ATCATGGGTT CCCAGGTCGG CTTGAAGTCC GACATCTATG CGCTGGGAGC CACGGCCTAT CATCTGCTCT GCGGCCACCC CCCCTATCAT GGCTACACGT TGACGCAGAT CTATTCGCGA AAAATGCTTC GGGATCCTGC GGCGTTGAGG GAACTCCGCC CCGGACTTTC CGCCGATTCG GTCTCACTCG TCGAGAGGAT GATTCACCGT GAAGAGACCG AGCGGCCCAA CGACTACGCG ACCCTGCTCC ATCGAATCGA CACAATCCAA CAGTCGACAG ACCCTGCCGG AGTGTCGGCG TCGATCCCAC AGAGGTCATC TGCCACACCA GGAACCTCCC CGGATCGATA CCGCCATTCA CTCGTTGCAT GGTCTCGCCG CCTGATGACC ATTTCCGCGA TTGTCGTCGG GCTGGCTGCC ATCGCCGCCG GGTTCTGGTG GTCTCTGCCG ATCAACCCCA AATTGACCGG GCCGAGGAAT TGGCAAGCTA CGGGCTGGGT TCGACAATGT TTCGATGGTG CGTCGCTCAA TGGATGGCGT ACGATTCGTG GAGCCTGGGT ACCCGGCGCG AAGGATGAGG AAGGAGGATT CGTCTTATCG GGAAGAGGTG CCTTGGGATA TCCCCTCGCC AAACCTGTGA ACGGTGGCAT GATGCGACTG GACGGCTTTC GCCTCTCCGT CCTATGGCAG AGACAGAGCG CGCAGATCGT TGAGCTGCAA TTTCCGGAGG AGCCGTCGGC CCGGCACGGC GAAACCCGGT CGATGGTCTT TCAAGCGACT CCCGACTCGA TCCGCTGGGG CCGTCGAATG CTCCCGACAG GAAGTCTGGA GACAGTTTTC GCGGAGCGGT TCATCACTCT GCCCGCCGAT TCGGTTCACG AACTGCGCGT CGAATTCCAG GGTGGGGAGT GGTTGGCGTA CCTCGACGGA CAACTCTTCG GGAGTTCCCC TTCCGGCCCC TTGCCATCTA ATGAGTTCCG TCTGGTCGCC GAAGTGGATC CGGGTGACGC CGAGGGGGCG GCGTGGTTCA GCGACATCTT GCTGGAGGAA CTCGGGCCGC CAATTTGA
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Protein sequence | MPLDDEFLAV AVRNGLLEQV VADQLGALSA SSGISSAQAA LNAGRLSHDQ IDVIEALRSP LDQIPGYELL SLLGQGGMGV VYKARQLAFD RIVALKLVRS GSASSTAVAR FENEIRTIGS FSHPHIVTAF DSGKHAGRLY LAMEYLDGQD AEVFIPKERF LPERIVWGMI RQVATGLAYA AERGVTHRDI KPANLLLVTP PSGYPLPEGV PFVKIADFGL ALLQEDFDAQ TRLTRENAAV GSPHYMSPEQ IMGSQVGLKS DIYALGATAY HLLCGHPPYH GYTLTQIYSR KMLRDPAALR ELRPGLSADS VSLVERMIHR EETERPNDYA TLLHRIDTIQ QSTDPAGVSA SIPQRSSATP GTSPDRYRHS LVAWSRRLMT ISAIVVGLAA IAAGFWWSLP INPKLTGPRN WQATGWVRQC FDGASLNGWR TIRGAWVPGA KDEEGGFVLS GRGALGYPLA KPVNGGMMRL DGFRLSVLWQ RQSAQIVELQ FPEEPSARHG ETRSMVFQAT PDSIRWGRRM LPTGSLETVF AERFITLPAD SVHELRVEFQ GGEWLAYLDG QLFGSSPSGP LPSNEFRLVA EVDPGDAEGA AWFSDILLEE LGPPI
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