Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_0525 |
Symbol | |
ID | 9137202 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 655600 |
End bp | 658281 |
Gene Length | 2682 bp |
Protein Length | 893 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | protein of unknown function DUF1549 |
Protein accession | YP_003628572 |
Protein GI | 296120794 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.491399 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGACCT GGAATGATGA ACTCTGGCAA CTGCTCGAAG CATTGTGCGA AGATCGCATA CATGCCGATG AGCTTTTGCG GCTGGAGCAG ATTGTTCTCT CGTCGAAAGA AGCCAGGCTC TTTTATATTC GATACATCGA CCTGCATGGC TCACTCTATT GGAACGCGGC TTTTGGTGCT CGGCAGGACG AAGTTTCTCC AACGGCTGAT GGAGACTCCT TGCTGGCTGC AACTGCTGAA GCTGGTTCTG ACGATACCGA TGCTGAAGTT AATCGAGGTT TGCAATCTGA GGAGAGCCCG GGTGAGTTGA CCTGGGAGCA GTTCTCATCA CTAATGGTCG AGAACATTTC AGAAAATGAA CCTCTGGTGT CAGTATCGAC CGATACGGAA GTTGCTCTAC CGGAGACGAA AGATACTCTC GGGCCCGAAG GTTATCTCTG GCAGGAACTC CCCTCGAGGT TAACGGCTGT TAAAGCGGTG CCAACCGCAT CTCAGTTGTC TCCTGCCGGG AAATCGACTC CAGGTTCGAT CTCCTGGCTG AGTGGGATGT TCGGAAATCG CAAGTCGCAA CGCAGTCGAC GCCTAAGGAA ATGGGTGAAA TCAACGGGCT CTGCATATGC AGGTATTGCT GCTGTGCTGC TGGTGTGTTT GTCGGTCGCT TACTGGCAAC CGATTTCTGG ACAGAGCGGC CAATTTCTGG GGAGCTTGTG GAAGCCGGCT GCCAAGCTTG ATTCGCCACT GGCAAGTCAT TCGGATCTGT CGACATCGGA TCCGGCCGGC TTGCAAACAA AGGGAGATAC CACGGCACAT CCTGCTGCTG AGATTAATGG GCCGCTCAAT CGTTCCAATT CCGAAGCGAC AGCTCGAACG AACGGTCGAA CACCGGTGGC ATTGCCACTT TCAACACTCG ATAAGCCTCA GGGAGTTTCG CAGGCCAATC CGACAGAGGA ACTGATTGCA CAGCGAGCTC AGGCTCTTAA AGAGCAGCAG GCGATGGCTG AAGAGGCTGC ACGGATTAAG TCGCTCTCGG AATCTGTCAG TGCGTTTGTT AAGTCGCCCT CCAAGCCGTC GATCGCCTTT ACTTATCCTC AGGGTCGGTT ATCGAGTGTC CAAGTCGTCT CTCAAGTGAA TGAGTACCTG ACGAAGACCT GGAAAGAGCA GAACCTTACG CCGGCTCCAT TGGCGAGCGA GGCTGTGTGG CATCGCCGAA TCTATCTGGA TCTTGTCGGC CATATTCCCA CATCAGCAGA AACCGAGGCC TATCTGTCGG ATCGTTCTCC AGGGCGTCGA GAACGGCTGG TGGACCGATT GCTGGACGAT CCTGGATTTG CCCGATATCT GGCGACGACT TGGACGAATC TTCTCGTCGG TCGGCATGAG CTGGAGACAG CCGATCGACA GGCTTTGCAT GAATACCTGC GTGTCAGCTT TGCAGGACAT CGCCCATGGA ACCGCATCGT CGAGGAACTT GTGTCGGCTA GTGGGCGTTC CCACGAAAAT GGGGCGACGA ATTTTCTGCT GGCCAACTTG AATCAAGATG CGTTAGCAGC CACCACCAGA ACCTCCCGAT TGTTTCTCGG GCAGAGCCTC GACTGCGTGC AATGCCACCA GCATCCCTTT GACGATGCCC GTCAGGCAAA ATTCTGGGAA TTGAACAGCT TTTTCCGTCA GGCCAGCAGT CGTCCCGTTC TCGTGCTCGA TCAGCAGACG GGAAAACGGG TGCAGGTGGC TCACGAGTTA TATGATCTGC CTGTCGCTGG CCCGGTTTAT TTTGAGACGA CGAATCAGAC ATCTGTCGCT GCTTTTCCGC GCTGGGCAGG GCAAGAGGTT GATGATTCTG CCACAACGCG TCGGCGGGTG GAGTTAGGTC GTATTCTGGC TGAAGATCAT GATCATCAAC TGGCACGTGC TTTCGTGAAT CGCCTGTGGA GTCAGCTCTT CGGTCGAGGG TTTACGACTC CGGTGGATGA TATGGGGGTT CACCAGCCGC CAGTCCATCC CGAACTGCTT GAGTTGCTGA CGCGCAATTT CGTTCAGGAA AACTACAGTA TTCGGGAACT GGTCCGTTGC ATGGTGAACT CGAGACCTTA CCAGTTGGCC TCGATCATGG AGTTAGATTC TGCTCCCAGG CCCCTGTCGA ATGCCACAGG GAGTGAGTCA GCGGTTCAGG AGGAGTCCAC GACTTTTGAA TTCATGCGTG CCAGGCCCCT TTCTCCTGAG CAGATCTTTG ATTCTTTTCT GATCATGAAA AGTCCTGTTC CTGGGCAACA GCAGTTCTGG ATGGAAGCCA TTGAAAAACG TCAGGAATGG ATTGCACCTT TTATTCAACA ACTTCCAACT GAAGAGAATC TTGAGACGAG TCTTTATGCT TCGCCATTAC AGGAAGTGCT TACACTGATG AACGGCGATC TGACTCAAGA TCTGCTTTCT GCCACATCAG GGACGCTTCT GGCGGAGACA TTGAAGCGAT ATACAAAGGA TGTCGATCGT GCAAATGCTC TCACGATGGC CATTGTGTCC CGCAAAGCGA CTGAAACGGA AATGACCATT CTTCGAACTG CTTTGACGAA GATCGTGGGC AAAGTCAAAA ATGGTGAAAA TGCCGAAGTG CTGACTCTTG ATCTCTGGCG TGATTTTGCC TGGGCTCTGC TGAATTCGTC AGAGTTTCGC ATGAATCACT AG
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Protein sequence | MSTWNDELWQ LLEALCEDRI HADELLRLEQ IVLSSKEARL FYIRYIDLHG SLYWNAAFGA RQDEVSPTAD GDSLLAATAE AGSDDTDAEV NRGLQSEESP GELTWEQFSS LMVENISENE PLVSVSTDTE VALPETKDTL GPEGYLWQEL PSRLTAVKAV PTASQLSPAG KSTPGSISWL SGMFGNRKSQ RSRRLRKWVK STGSAYAGIA AVLLVCLSVA YWQPISGQSG QFLGSLWKPA AKLDSPLASH SDLSTSDPAG LQTKGDTTAH PAAEINGPLN RSNSEATART NGRTPVALPL STLDKPQGVS QANPTEELIA QRAQALKEQQ AMAEEAARIK SLSESVSAFV KSPSKPSIAF TYPQGRLSSV QVVSQVNEYL TKTWKEQNLT PAPLASEAVW HRRIYLDLVG HIPTSAETEA YLSDRSPGRR ERLVDRLLDD PGFARYLATT WTNLLVGRHE LETADRQALH EYLRVSFAGH RPWNRIVEEL VSASGRSHEN GATNFLLANL NQDALAATTR TSRLFLGQSL DCVQCHQHPF DDARQAKFWE LNSFFRQASS RPVLVLDQQT GKRVQVAHEL YDLPVAGPVY FETTNQTSVA AFPRWAGQEV DDSATTRRRV ELGRILAEDH DHQLARAFVN RLWSQLFGRG FTTPVDDMGV HQPPVHPELL ELLTRNFVQE NYSIRELVRC MVNSRPYQLA SIMELDSAPR PLSNATGSES AVQEESTTFE FMRARPLSPE QIFDSFLIMK SPVPGQQQFW MEAIEKRQEW IAPFIQQLPT EENLETSLYA SPLQEVLTLM NGDLTQDLLS ATSGTLLAET LKRYTKDVDR ANALTMAIVS RKATETEMTI LRTALTKIVG KVKNGENAEV LTLDLWRDFA WALLNSSEFR MNH
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