Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_0429 |
Symbol | |
ID | 9137088 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 533134 |
End bp | 534840 |
Gene Length | 1707 bp |
Protein Length | 568 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | ATP-binding region ATPase domain protein |
Protein accession | YP_003628478 |
Protein GI | 296120700 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.796172 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGGGGCG ACCTGCCTGC ACTCGATGCC AGGCTCAATG CCCTCTCGGC CGAGTTCGAT ATTCCCTCGG AAGAGGGGAC AGATCGAAAT GCGAAGCTCT GTCAACAGCT TTCGGGAATC GACCCTCACT CGACGAGAGA AGGATCGAAG TCTGACAAAG CTGCTCGCAC TTCAACTTCT CAGGGTTCAA CAACTCGGGC GCACGATCTG GAACCACAAT CTTCTTCGAG CCCATCGCCC GGCAAGCCGC CACAACGGCG GATTTTTCAG GCCCATTATT CGGTTCTTTT GCCGCTGATT ATCCCGGTGG CTGTCTTTGG CCAGACCGCA GTTCTGCTCT GTATTCTGCT GTTTGGCACG CCCATCAGTT CTTTGATCGT CTTTTTGTTC TGTCTGGGTG GTGTGCTGAT CAGCGCTATG ATTGCCGCCC GCTACGAAGC CGATGCCGCC AGGAGGCTTG GTCAACCTGA GAATCGCACA CAATTGACAG CAGATCTGGT GCTGTTTCGA AACATTATCT CGGAAGCCAA CCATCTCTTA CAGCAGGCCG AAAAACGAAC GGCAGAAGCA GTGCATGCCC GAGCGACTGT CGAAGCGCGA TTCAAAGTGC AGAAACGTCA CGTCCGCCGT CTGGAAATGG CTTTGGATGA CATGGAACAA CCAGTGGTCG TGACCGATGT CAATGGGCAT GCGCTGTACC AGAATGAATC TGCGAGAAGT CTTTACAAAC AGATCAGCCA GAAACTTGCA CGGGAAATTC AAGAACAGAC GGGGCTGATT GACATTCTCG AAGGGATGAA GCCGCTGCTG CAGGAGACTT TGACGCGGCG AGTGGCGAGT GATCGCAGAA CAGCCGATAT TCCCTGTCTG ACCACGACGT ATCGAATTCA TGCACATACT CTCAAAGAGA ACGAAAACAC CCTGCTGGGG GCCGCGCTGG TTCTGCAGGA TATCGGGCGA GAGGTGCAGG ATCGCAGCCG GCATGCGGAG TTTGTCTCTT CGGTCTGCCA CGAGTTCAAG ACACCCATGT CGAGCATTAA AGCTTATGCA GAGCTACTGC GCGATGGCGA GATTGATGAA GCTGAAGAAC AGCAGAAGAT TCTGGTGTTC ATCGATGAAC AGGTTGATCG CCTGAGCCGG CTGGTCGACA ATATGCTGAA TCTGGCACGG ATTGAAAGTG GTGTGATTCG AGTTCAGAGA AAAGATGTCG AAATCAACCG CTTGCTCAAG AGTGCGCTCG ATGTGGTGAC TCCTCAGGCT GCAGCGAAAT CGCAGACCGT CGAATCGCTA CTGAGTGATC TTTATATCCC CGCCCATGTC GATGAAGACC TCTTCAGCCA GGCCGTCGTG AATCTGTTAT CGAACGCCGT GAAGTACACC CCAGCCGGCG GGAAGATTTC CCTCAAAAGC CGTTTGGAAG AAGATCGTGT CCTGATTGAA GTCCGGGATA CCGGCATGGG GATTCCGGCG GCCAGCCTGC CTCGACTCTT TGAGCGGTTT TATCGAGTCC CGGAGAATAT GAAAGCTGCT GCAGGAACGG GTTTAGGCCT GGCACTTGTG AAATACATCA TTTCCAGCAT CCACGACGGA TCCATCAGCG TCTCTTCCAA ACAAGGTGAA GGAAGCTGCT TTACGATCAG CATACCGGCT GGTCATCGCA TTCGAAAAAC ACATCGTGTT AACGACCACG TCCTGCTCGA TAACTGA
|
Protein sequence | MRGDLPALDA RLNALSAEFD IPSEEGTDRN AKLCQQLSGI DPHSTREGSK SDKAARTSTS QGSTTRAHDL EPQSSSSPSP GKPPQRRIFQ AHYSVLLPLI IPVAVFGQTA VLLCILLFGT PISSLIVFLF CLGGVLISAM IAARYEADAA RRLGQPENRT QLTADLVLFR NIISEANHLL QQAEKRTAEA VHARATVEAR FKVQKRHVRR LEMALDDMEQ PVVVTDVNGH ALYQNESARS LYKQISQKLA REIQEQTGLI DILEGMKPLL QETLTRRVAS DRRTADIPCL TTTYRIHAHT LKENENTLLG AALVLQDIGR EVQDRSRHAE FVSSVCHEFK TPMSSIKAYA ELLRDGEIDE AEEQQKILVF IDEQVDRLSR LVDNMLNLAR IESGVIRVQR KDVEINRLLK SALDVVTPQA AAKSQTVESL LSDLYIPAHV DEDLFSQAVV NLLSNAVKYT PAGGKISLKS RLEEDRVLIE VRDTGMGIPA ASLPRLFERF YRVPENMKAA AGTGLGLALV KYIISSIHDG SISVSSKQGE GSCFTISIPA GHRIRKTHRV NDHVLLDN
|
| |