Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_0383 |
Symbol | |
ID | 9137042 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 478701 |
End bp | 479570 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | apurinic endonuclease Apn1 |
Protein accession | YP_003628433 |
Protein GI | 296120655 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.469557 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCGATTC TTGGTGCGCA CATGTCGATT GCGGGGGGCT GTTATAAAGC CCTCGAAGCG GGTCATCGCC TGGGGATGGG CTGCGTGCAG CTCTTCACCA AGAATAACAA TCAATGGCGG GGGAAACCGC TGACAGAGGA CGACATTCGC CAATTCCAGA CGACCTGGAA ATCGACCGGA ATTCAGGCCA CCTGCGCTCA TGCCAGTTAT CTGATCAACT TAGCCAGTCC TGATGACGTG CTTTGGAATA AATCCTGCGA TGCCCTCGTG GATGAACTGG AGCGAGCCGA AGCGCTGGGG ATTCCCGGCG TCGTGTTGCA TCCCGGCAGT GCCGTCAAAT CGACGCCCGA AGCCGGGATT ACCCGCGTGA TTGAAGCCCT GGACGATGTC CATGCGAAGT GCAAAGGATT TCGGGCTCAG GTCTGGCTCG AAACGACTGC CGGTCAGGGA AGTTGCCTCG GCGCCCGGTT TGAAGAGTTG TCTCAGATGC TCGATGGTGT GCGGGAACCG GATCGAATTG GAATCTGCAT CGATACCTGT CACATTTTCG CCGCTGGTTA TCCACTACAT ACGGCTGATG ATTACGCGGA CACTTTGGAG AAGTTTTCGC AAAAGATTGG CTTCGATCGC GTGCGTGCGT TTCATCTCAA TGACAGTATG AAAGGGTTGG GCAGTCGGGT GGATCGACAT GCCCATATTG GCGAAGGGCA GCTGGGTCGC ATCCCTTTTT CGCGATTGCT CCATGACGAT CGGTTGTCCC ACATCCCCAA GTATCTGGAG ACCGAAAAAG GGGAGCGGGA TGGCGTGGAT CTCGATCTGA TCAATTTGCA GACACTCCAG CAACTCATCG CGAATCCTGA ACACGACTGA
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Protein sequence | MSILGAHMSI AGGCYKALEA GHRLGMGCVQ LFTKNNNQWR GKPLTEDDIR QFQTTWKSTG IQATCAHASY LINLASPDDV LWNKSCDALV DELERAEALG IPGVVLHPGS AVKSTPEAGI TRVIEALDDV HAKCKGFRAQ VWLETTAGQG SCLGARFEEL SQMLDGVREP DRIGICIDTC HIFAAGYPLH TADDYADTLE KFSQKIGFDR VRAFHLNDSM KGLGSRVDRH AHIGEGQLGR IPFSRLLHDD RLSHIPKYLE TEKGERDGVD LDLINLQTLQ QLIANPEHD
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