| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_0336 |
|---|
| Symbol | |
|---|
| ID | 9136994 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | + |
|---|
| Start bp | 418814 |
|---|
| End bp | 421288 |
|---|
| Gene Length | 2475 bp |
|---|
| Protein Length | 824 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003628386 |
|---|
| Protein GI | 296120608 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.662128 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCGAA AACGCTCAGG TTCACAAAAA CCTCCTCCTC CGGCTGCTTC ACACTCATCG
AGTCTTGAAG CTCCACACAC ACCAGACTTA TCTCGAACAG TTCGCTGGGT AATCGCCTGT
CTCTGGCTGG TGTTGGCAAC CATTTTCTTC TACTGGACGG GTTTGCCGAA CAATGGCAAC
GTTTCCCGGC TCGATTACTG GTCGCTGGTC CCTTTCCAAC TGATGGATCT CGTCGATCCC
GAGTTTGAAT CACGATTGCC ACATGGATTC TTCTATCTGT TTGAACGCAT CGGCTACTCG
CTGGTTTCTG CGGCTCTCAT CATTGGTTCG GCTGGCTGGG GCTGGCTGCT GATCCTGGGA
TCGAGTCGTC TATTCAAAGC GGATGTCTTT GCAAAGCAGG AATCGATCAA TCAGGTAACC
CTTGCGAATA ACGAAAGTCG CTTTCAAACG GGGAATCTGC TGTTCTTCTC CGGCGCTCTG
GGGCTCGCCA CGACTTCGAC TTTCGTGCTG ATTGTGGGGC TGATGGGGCA GTTATCGACC
ATCCTGCTGG TGGCCTGGCT GGTCGTCGGA AGTGCCGGTA CCTTCGTGGG TTTAGCTCAG
CCCGCACTTC GGTTAGGCCA ACTGGCGTGG TTATCGATCG CTAATGCCTG GCATTCCCGC
GATCTCTGGA CGCTGTTGGG TTGGGTCTCG GCACTGCTAT TTCTATGGAC GATCTGGCTG
GGTGGCTTAT CGCCCACCAC CGACTTTGAT GTGAAGGAGT ATCATCTCGG CGGGCCCAAA
GAATACTTCC TCAAGGGTCA CATCGAGTTC TTGCCACATA ACGTCTACAC AAGTTTTCCG
TTTCTTACCG AGATGCTGTC ACTGGCCGCC ATGGTGTTGA TGAATGACTG GCTGGCAGGA
AGCTATGTCG CCACACTCAC GCTCGCTTTC TTCGGACCGC TGACGGCTCT GGGATTATGG
TCTCTTTGTG AGAAGTGGTT TCCGCAGGCC GCTCTTCTAT CAGCCTGGAT CTGGATCACG
ATTCCCTGGA CGTACCGGCT ATCGACCATT GCCTATGTCG AAGAAGCCTT TTCGTGCTAT
CTGCTCGCTG CTTTCCTTGC TGCTATCTAT GGACGATCCT TGAATCTCCC GGAAGTGAGT
CATTCCGCAT CATCAGCAGC GCATGCCAAT TTCTGGTGGT GGATCTCCGG GTTGTCTGCC
GGTGCTGCTT TTGGCTGCAA ATACCCGGCA CTCCTCTTCG TGGTCATCCC CATCGGCCTG
GCAACGATCA TTCGGTTTCC ACGTTTCCAT AAGACCGACA GCTCTGCGAG TGAAAATCCA
TCAGCCAGGT CACGCAGCAC ATGGTGGGTC TGGCCACTGG TCTTTTCTGC CGGCGTGCTC
GTCTTTGCTG GCCCCTGGCT GATTAAAAAC TTCTGGCAAA CCGGGAACCC CGTTTATCCC
CTGCTCTACT CTGTCTTTGG TGGCCTCGAC TGGAATGCGG CACTCAATGA AAAATGGAGG
CGTGGGCATG CCCCACCCCA TTATTCGCCC CTTTCGTTTG TTACCGATGT TTACGACATC
CTGGCCCGCA GTGATTGGCA AAGTGGCCTC ATTCTGCTGG GCTTACCTCT CTGCTGGATT
TTGCCTGCCG CTCGCAAAAA AAATCATGAA CAACCCGAGG ATTCCCCAGG CGTTCTCCTC
CTGGCTCTCT TGTTTCTGGC ATGGTTCTAT GCCACCTGGT GGTTGTTCAC ACACCGGATT
GACCGCTTCT GGGCACCAAT GCTCCCTCTG CTCTGCCTGA TCTCGGCTGC AGGGCTAACG
CGCTTTTCTC AGAGTGTCCC CCATGCAGTC AGGCAATCCC TGATGGTCCT GCTAGGGGCA
TCGGCAGTCT TCAATTTCTC GATCAACACC GGCCCCGTCG GTAACTACAA CTCATGGCTG
ACCAAACTCT CTGCGGCCAG CGATTTCACT GCGAGAACCA CTTGCCCCGA GATCGCCGCC
ATCAATCAGG CTATTGAGGA GGGTGCACTT CCCCAAGACA TTCGCGTCCT CATGGTCGGA
GAGGCAGAAA TCTTCGATGC ACGTTTCGAT TTGAGATACA ACACCGTCTT CGATGTATGT
TTACTGGAAG AGTGGTGTAC TCACCCAGAC GGCCAGTGGC GTACCGCCGA TGAGATTCGG
GCGCGCCTGG CACAAGCAGG CATTACCCAT CTCTTCGTCA ATTGGCGGGA AATTCTGCGT
TATCGAACGA GCTATGGCTA CACCGACTTT GCGAATCCCA GGAGCATCGA AAAGCTCCAG
CAGATGCAGC TGATTGGCGA TCCGCTTCGA TGGCCCGAAG GGATTGGTGA ACGAAATGCC
GACGATCTTT CCGTTACAGA CCGTCAACTG ATTGAAAACT GGGCACCGCA ATTGATTCAA
GGCCTCGGTT CCAATCAGAA GCTGATTACG GCACAACTCT TTCCAGTCAT GACACGGCCC
ATCGAGGCGA AGTGA
|
|---|
| Protein sequence | MSRKRSGSQK PPPPAASHSS SLEAPHTPDL SRTVRWVIAC LWLVLATIFF YWTGLPNNGN
VSRLDYWSLV PFQLMDLVDP EFESRLPHGF FYLFERIGYS LVSAALIIGS AGWGWLLILG
SSRLFKADVF AKQESINQVT LANNESRFQT GNLLFFSGAL GLATTSTFVL IVGLMGQLST
ILLVAWLVVG SAGTFVGLAQ PALRLGQLAW LSIANAWHSR DLWTLLGWVS ALLFLWTIWL
GGLSPTTDFD VKEYHLGGPK EYFLKGHIEF LPHNVYTSFP FLTEMLSLAA MVLMNDWLAG
SYVATLTLAF FGPLTALGLW SLCEKWFPQA ALLSAWIWIT IPWTYRLSTI AYVEEAFSCY
LLAAFLAAIY GRSLNLPEVS HSASSAAHAN FWWWISGLSA GAAFGCKYPA LLFVVIPIGL
ATIIRFPRFH KTDSSASENP SARSRSTWWV WPLVFSAGVL VFAGPWLIKN FWQTGNPVYP
LLYSVFGGLD WNAALNEKWR RGHAPPHYSP LSFVTDVYDI LARSDWQSGL ILLGLPLCWI
LPAARKKNHE QPEDSPGVLL LALLFLAWFY ATWWLFTHRI DRFWAPMLPL LCLISAAGLT
RFSQSVPHAV RQSLMVLLGA SAVFNFSINT GPVGNYNSWL TKLSAASDFT ARTTCPEIAA
INQAIEEGAL PQDIRVLMVG EAEIFDARFD LRYNTVFDVC LLEEWCTHPD GQWRTADEIR
ARLAQAGITH LFVNWREILR YRTSYGYTDF ANPRSIEKLQ QMQLIGDPLR WPEGIGERNA
DDLSVTDRQL IENWAPQLIQ GLGSNQKLIT AQLFPVMTRP IEAK
|
|---|
| |