| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_0316 |
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| Symbol | |
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| ID | 9136973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 396621 |
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| End bp | 397259 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | RNA polymerase sigma factor, sigma-70 family |
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| Protein accession | YP_003628366 |
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| Protein GI | 296120588 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTCTC AGGCCCCCAC GGATGATGAA TTGATGCTGG CCGTCCAGAC GGGTGAGACG
CGGGCATTCA ATCAGTTGGT ATCGCGTTAT CAGGGGCCAC TGATGGGTTT TTTCGTGCGT
CAGATCCATG ACGTGCAACA GGCGGAAGAC CTGACCCAGG AGACGTTGCT GCGGGTTTAT
AACCAGTCGT GGGATTATCT GCCGCGAGGT GCATTTCGCG GCTGGCTGTT TCGGATTGCC
AGAAATCTGC TGGTCGATAA CTTACGCCGC AGGTCGAGCG ACGCCTTGAT CCATACGATT
CAACCTCGCC AGGAAGAAGA CGAACTGTTG CAGAACATGG TGGGAGAGAT CGGCTCCCCG
GAACAGGTGG CTGATATTCG CGAAATCGCG GCACTCGTCG ATGAGTTTTT GAAAGAACTT
CCTGAAGAGC AGCGATTAAC GTTCATTCTG CACCACTACA ACCAGTTGAC GTTGCCCGAA
GTGGCTGACT CGCTGGAAGC CAATCTGCCC ACCACCAAAA GTCGTCTGCG TCTGGCGAAA
GAAAAGCTGC GACAGAAGCT GCAGGCTCGC GGAATCCTCG AATTCCCGAA TTTGCTGGCT
GAGGCTGACG GAGAAAGCCG CTCGCAGGAG CTGGATTAA
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| Protein sequence | MSSQAPTDDE LMLAVQTGET RAFNQLVSRY QGPLMGFFVR QIHDVQQAED LTQETLLRVY
NQSWDYLPRG AFRGWLFRIA RNLLVDNLRR RSSDALIHTI QPRQEEDELL QNMVGEIGSP
EQVADIREIA ALVDEFLKEL PEEQRLTFIL HHYNQLTLPE VADSLEANLP TTKSRLRLAK
EKLRQKLQAR GILEFPNLLA EADGESRSQE LD
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