Gene Plim_0297 details

Gene Information

• Locus tag: Plim_0297
• ID: 9136952
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: -
• Start bp: 376281
• End bp: 377036
• Gene Length: 756 bp
• Protein Length: 251 aa
• Translation table: 11
• GC content: 57%
• Product: short-chain dehydrogenase/reductase SDR
• Protein accession: YP_003628347
• Protein GI: 296120569

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.677514
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCCTAA AAGACAAGAT CATCATCATT ACCGGAGCCG CTTCTGGCAT GGGACGCGCG 
GCGACTGAGA TGTTGTGCAA TGAAGGCGCG GTGGTGTACG CCGCTGACCG GCAACAAGAG 
ACTTTGGAAC AGGCCTGCGA GACGACCGGC GCTTGTCCAA GTGTGATCGA CATCAGTTGT 
TCGAGCGAGT GCGATGCGCT GGTGACACGC GTTGTTCAGG AGCGGGGAAG ACTTGACGGA 
ATCGTTAATT TCGCTGGGGT CCTCAAACGC ACCGGAATTG TTGACTGCAC GGATGAGGAG 
TTCGACTTCG TCATGAATGT CAACGTCAAG GGTTGCTTCT ATCTTTGCCG CGCCGCCGCT 
CGTGTGATGA AGAAGCAGGG GTTCGGCTCG ATTGTGAACG TCAGCTCGAT TTGGAGTGAC 
GTTGGTGCTG CCGGCGTGTT GGCCTACTGT GCCTCGAAAG GGGCCGTCAG CCAAATTACA 
CGCAGCGCAG CGCTCGACTT GGCTGGCAGT GGCGTTCGCG TGAATGAAAT TCGCCCGGGC 
GAAACCAATA CGCCCATGCT CGCCTCGGAG CGAGGCCGTT CGCTGACGCA GCAGGAAATC 
GACGAAAAGC TCAAGCAGAT CGCTGCCACC ATCCCGGAGA AACGTCTTGC CGATCCGCAT 
GAGATCGTAG CGGCCGCACT CTTCCTTCTC TCCGATGCTT CAAGCTACAT GCAGGGAAGC 
TCTATTACCG TCGATGGAGG TTACACGGCA TGCTAG 

 

Protein sequence

MTLKDKIIII TGAASGMGRA ATEMLCNEGA VVYAADRQQE TLEQACETTG ACPSVIDISC 
SSECDALVTR VVQERGRLDG IVNFAGVLKR TGIVDCTDEE FDFVMNVNVK GCFYLCRAAA 
RVMKKQGFGS IVNVSSIWSD VGAAGVLAYC ASKGAVSQIT RSAALDLAGS GVRVNEIRPG 
ETNTPMLASE RGRSLTQQEI DEKLKQIAAT IPEKRLADPH EIVAAALFLL SDASSYMQGS 
SITVDGGYTA C