Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_0240 |
Symbol | |
ID | 9136895 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 308861 |
End bp | 311707 |
Gene Length | 2847 bp |
Protein Length | 948 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | peptidase M16 domain protein |
Protein accession | YP_003628291 |
Protein GI | 296120513 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.239759 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATCCGCA GGACGATGCG TCTCTTGAAT CAAGTGACAG CACAGGCTGT TCTGGCCCCG GTGTTATCGA CCCGGATGTT TTTAACCCGG AAGGGTCTGA CCTCTCGACA ATCTGTTTTA TCTGGTGCTG CCCGCCTCTC CCTGCTGGCG ATGGTCATTG TCAGCCAGAT CATCTTCTGT TCCTCCAGTT CAAAAGCCGA AATGCCCATG AAAGTTACTG AGATCGAAGG GATCAGCGAA TACAAACTCG AAAACGGCCT GCGCGTGCTC CTGTTTCCAG ATCCTTCCAA ACCCACTGTG ACAGTCAACC TGACGGTCTT CGTCGGGTCG CGTCATGAAG GTTATGGCGA AGCCGGCATG GCTCACCTCC TCGAACACAT GCTCTTCAAG GGGACACCAG ATGTTCCCAG TGTCCCCAAA GCCCTGCAGG AACGCGGTGC CGACTTCAAT GGCACGACCT GGCTCGACCG CACCAACTAC TTTGAAACGC TCCCGGCCCA AGGCGACAAC CTCGAGTTTG CCATTCGCCT CGAAGCCGAT CGCATGATGA ACAGCCATGT CAAAGGAGAA GACCTCACTT CCGAAATGAC GGTCGTGCGT AACGAATTCG AACGTGGTGA AAACAGCCCT GCTTCCATCC TTGGTCAACG CATGATGGCT GCGGCCTTCG AATGGCACAA CTACGGCAAA TCAACCATTG GTAACCGGGC CGATATTGAA CGAGTCCCGG TTGAACGTTT GAAATCGTTC TATCGCAAGT ACTATCAGCC TGATAACGCC ATGCTCGTCG TCGCGGGCCG CTTTGAACCC AAAGAAGCCT TGCGGATTAT CGGCGAAACA TTCGGCAAGC TTCCTCGGCC CACGCGCGTG CTCGATAACA CTTACACCGA AGAACCTGCT CAAGATGGTG AGCGTCAGGT CGTTCTCCGC CGGGTGGGAG ATGTCGCTGT CGTCGGTGCG GTTTATCACA TTCCTTCCGG GGCTCACCCG GATTTCGTGG CCATCGACGT TCTCGAATCG ATCCTTACCA TGCAGCCCTC GGGTCGATTG TACAAAGCTC TGGTTCAAGG CAAGAAAGCC GCCAGTGTTT CCGGTGCCGC CTATGCCCTG CATGATCCCG GTGTGCTTCG ATTTATGGCC GAAGTCGCCG CTGGTAACGA TCCACAGGTC GTCCTCGATT CCATGCTCGA TGTCCTCAAT GAGACCGCAT CAAAAGGCGT CACTCAGGAA GAGCTCGAAC GCGCTCGCTT GCGTCTGCTC AAGCAGCGGG AAATGGGAGC TTCAGACTCT GCCGAGATTG CCATCGAACT GAGTGAGTGG GCCGCCCAGG GGGATTGGCG ATTGTACTTC CTCTATCGTG ATCGCCTCGA AGCCGTCACT GTCGAAGACG TCAACCGCGT GGCCAAGGCG TATCTCCAGC CATCCAATCG AACTGTGGGC CTGTATATTC CCACCGAAAA GCCCGAACGC ACTTCGGTTC CTGCGACTCC CGAACTCGCC AAGATGATTG GGGATTACAA GGGCCGCGAA GAAACCTCCG TGGGCGAAGC GTTCGACGTC AGCCCGCTGG CGATCGAAGA GCGTACCCTT CGCACCAGGA TTGATGGCGT CCAGGTTGCC ATGCTCCCCA AAAAGACCCG TTCTTCAACT GTCGTCTTGC GATTAACCCT CCGCTATGGC AACGAAAAAT CACTCTTTGG CCTCGCTAAG GCCTGCGAGT TTTTGCCCCC GATGATGCTC CGCGGCACCA AGTCACTCAC CCGGCAGCAA CTGCAGGATG CGCTCGACAA GAACTTTGCT TCACTCAGTG CTGGTGGCAA TGCGGGCGAA GCGACGTTTG TCCTTGAGAC CAAACGCCAG AATCTGGTGG CAGTCCTGGG CTTATTGAAG CAGGTTCTAC GAGAGCCTGC GTTCCCGGAA AGTGAACTGG CTGTCATCAA GCAGCAGGTC AGAGCCAATC TCGAACAGGG TCTGACAGAT CCTCAGACAC TGGCTGTCAA AACGGTCTCA AAGGCTCTTT CGCCTTACCC TGCTGGCGAT GTTCGCTCAG TTCCTACCGT GGAAGAAGAA CTCAAACTCG TCGAAGCAAT TGAAGTGGAA GGCCTCAAGC TGCTCTACAA CGATTTTCTG AGTGCTCAAG TCGGCCAGAT TGCGATTGTG GGCGACTTCG ATCCAGCCGA AGTCGAGTCA ACTCTCAAGG GAGTACTGGC CGATTGGAAG TCCGATCAGA CGTACGAACG CATTAGCCGC ACCGGGTCTG TTCCGATCAC AGCCGAAGTG AAGCGGATTC AGATTCCCGA TAAAGCCAAT GCCTTCTACT TTGGTGGTGC CGTCATGCCG ATGAGTGACG ATCACCCCGA TTACCCAGCC ATGATTGTGG GCAATTATGT GCTCGGAGCT GGCGCACTTT CCTCGCGGCT GGGTGACCGC ATTCGTCAAA AGGAAGGTCT CTCGTATGGG GTGGGCTCCG CCTTCCGGGC AGCCATGCTC GACCAGCGGG CCACGCTTTC CCTCTATGCC ATTGCCAATC CGGCGAACAT GGAAAAGGTG AATGCTGCGG TCAACGAAGA ACTCGCCCGA CTGCTGAAGG AAGGGGTCAC GCAGCAGGAA CTGGACGCCG CCAAGCAGGG CTATCTGCAA GCCCAGCAGG TTGGTCGTAC AGAAGACCCC AAGATCGCCC GGCTGCTCGA AGAAAACCTT TACGCTGGCC GCACCATGCA GTATGTCGCC AAACTTGAAA CAGCAATTGG CGACCTGACG ACGGAAAAGG TTCTGGAAGC CGTCCGCAGG CACATCCATC CCAACCAGAT CCTCACTGTG ATCGCGGGAG ATCTGGCCAA GGAGTAA
|
Protein sequence | MIRRTMRLLN QVTAQAVLAP VLSTRMFLTR KGLTSRQSVL SGAARLSLLA MVIVSQIIFC SSSSKAEMPM KVTEIEGISE YKLENGLRVL LFPDPSKPTV TVNLTVFVGS RHEGYGEAGM AHLLEHMLFK GTPDVPSVPK ALQERGADFN GTTWLDRTNY FETLPAQGDN LEFAIRLEAD RMMNSHVKGE DLTSEMTVVR NEFERGENSP ASILGQRMMA AAFEWHNYGK STIGNRADIE RVPVERLKSF YRKYYQPDNA MLVVAGRFEP KEALRIIGET FGKLPRPTRV LDNTYTEEPA QDGERQVVLR RVGDVAVVGA VYHIPSGAHP DFVAIDVLES ILTMQPSGRL YKALVQGKKA ASVSGAAYAL HDPGVLRFMA EVAAGNDPQV VLDSMLDVLN ETASKGVTQE ELERARLRLL KQREMGASDS AEIAIELSEW AAQGDWRLYF LYRDRLEAVT VEDVNRVAKA YLQPSNRTVG LYIPTEKPER TSVPATPELA KMIGDYKGRE ETSVGEAFDV SPLAIEERTL RTRIDGVQVA MLPKKTRSST VVLRLTLRYG NEKSLFGLAK ACEFLPPMML RGTKSLTRQQ LQDALDKNFA SLSAGGNAGE ATFVLETKRQ NLVAVLGLLK QVLREPAFPE SELAVIKQQV RANLEQGLTD PQTLAVKTVS KALSPYPAGD VRSVPTVEEE LKLVEAIEVE GLKLLYNDFL SAQVGQIAIV GDFDPAEVES TLKGVLADWK SDQTYERISR TGSVPITAEV KRIQIPDKAN AFYFGGAVMP MSDDHPDYPA MIVGNYVLGA GALSSRLGDR IRQKEGLSYG VGSAFRAAML DQRATLSLYA IANPANMEKV NAAVNEELAR LLKEGVTQQE LDAAKQGYLQ AQQVGRTEDP KIARLLEENL YAGRTMQYVA KLETAIGDLT TEKVLEAVRR HIHPNQILTV IAGDLAKE
|
| |