Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_0185 |
Symbol | |
ID | 9136839 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 239833 |
End bp | 240675 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | diaminopimelate epimerase |
Protein accession | YP_003628236 |
Protein GI | 296120458 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00343666 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTTTCA CTAAAATGCA TGGAATCGGC AATGATTACG TCTATGTGAA TCTGTTCGCA GAGAAACTTC CGCTCGCTGC GCCCGATTTG GCCCGAATCG TTTCGAACCG CTACAAGGGA ATTGGTGGCG ACGGGCTGAT CCTCATTGGC CCATCCGAAC GCGGCGATGC CCGCATGCAG ATGTTCAATG CCGACGGCAG CGAATCGGAA ATGTGCGGCA ACGGCGTTCG CTGTGTGGCC AAGTATGTCT ATGATCACGG CATTGCCAAA AAGCCTGAAC TCAGAATTGA GACTGGCCGA GGTGTGTTGA CTCTCCAGAT GTTTGCGGGC TCTTCTGGTA AGGCGGAACG TGTCCGCGTC AACATGGGGA CACCGATTCT CAAAAGTGCT GATATCCCCA CAGCATTGCC CGGGGATCCG CCTGTGAATC AACCGCTGGT TGTGGGCGAC AAAACCATCT CCGTCACCTG TGTTTCGATG GGGAATCCGC ATTGCGTGAC ATTTGTGGAT GAGCTGACGG ATGCCTGGGT GCTGGGCCTT GGGCCGCAAG TCGAAGTGCA TGCCGCTTTT CCACGCCGGG TGAATGCCGA GTTCGCACAG GTCCTTTCGC GGACCGAAAT TCAATTGCGT GTCTGGGAAC GTGGCAGTGG TGAAACTCAG GCGTGTGGAA CGGGAGCTTG TGCCACACTC GTGGCAGGTG TGCTCTCTGG TCGGACTGAC CATCAGGCAC TGATTCATCT TCCTGGTGGT GATCTCGAGA TTGAATGGCC CGATGAAAAG GAAGTCTTTA TGACGGGCCC CGCGACCGAA GTTTTTACTG GTGAGTGGTT CCCTGAGGTT TGA
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Protein sequence | MRFTKMHGIG NDYVYVNLFA EKLPLAAPDL ARIVSNRYKG IGGDGLILIG PSERGDARMQ MFNADGSESE MCGNGVRCVA KYVYDHGIAK KPELRIETGR GVLTLQMFAG SSGKAERVRV NMGTPILKSA DIPTALPGDP PVNQPLVVGD KTISVTCVSM GNPHCVTFVD ELTDAWVLGL GPQVEVHAAF PRRVNAEFAQ VLSRTEIQLR VWERGSGETQ ACGTGACATL VAGVLSGRTD HQALIHLPGG DLEIEWPDEK EVFMTGPATE VFTGEWFPEV
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