Gene Plim_0179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0179 
Symbol 
ID9136833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand- 
Start bp233685 
End bp234422 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content54% 
IMG OID 
ProducttRNA (guanine-N1)-methyltransferase 
Protein accessionYP_003628230 
Protein GI296120452 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.861166 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGTTCG ATGTCCTGAC GCTGTTTCCA GGGATCTTCG CTGGCTATCT GCAGCAAAGC 
CTTCTCAATA AGGCGATTGA AGCAGGTAAG GTCGGCGTGC ATCTGTGGAA CTTCCGCGAA 
TGGACGACCG ATAATCATCA CTCGGTTGAC GATAAGCCTT ATGGCGGTGG GCCAGGCATG 
CTCATCATGT GCCCGCCGGT TTTTGATTGT GTCGAGCATG TGCAGGCTCA GGGAGATGCT 
CCCGGCCAAC TGATCATGCT CACGCCAGCG GGTCGAAAGC TCGATCAGCG TCTGGTGGAA 
GAACTCTCGA CTCACAAACG TCTGGTTTTG TTATGTGGTC GTTATGAAGG TTTTGATGAA 
CGGATCGCTG AAGGATTGAA GCCGATGGAA GTTTCGGTGG GTGACTTTAT TGCCAATGGT 
GGTGAAGTGC CGGCCATGCT TCTGATCGAC ACTGTCATTC GGTTGATTCC CGGAGTGCTG 
GGTGACGAAA CCAGCCATAA GTATGAATCA TTCGCCCAGA GTGGACAGCT TGAATATCCG 
CAGTACACCC GTCCCAGGGA GTATCGCGGG ATGAAAGTTC CCGATGTCCT GCTGGAGGGA 
AACCATCAGG CCATTGCGGC CTGGAGAGAA CAGCAAAGTC AGGAAAGGAC AGCCACCCGT 
CGCCCGGCTG TGGAGCTTCA AAGAGCTTCC GTACAGGCGA TGAGATCTTC CTCCGAGATT 
TTGCCTTTGC CGAAGTGA
 
Protein sequence
MRFDVLTLFP GIFAGYLQQS LLNKAIEAGK VGVHLWNFRE WTTDNHHSVD DKPYGGGPGM 
LIMCPPVFDC VEHVQAQGDA PGQLIMLTPA GRKLDQRLVE ELSTHKRLVL LCGRYEGFDE 
RIAEGLKPME VSVGDFIANG GEVPAMLLID TVIRLIPGVL GDETSHKYES FAQSGQLEYP 
QYTRPREYRG MKVPDVLLEG NHQAIAAWRE QQSQERTATR RPAVELQRAS VQAMRSSSEI 
LPLPK