| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_0128 |
|---|
| Symbol | |
|---|
| ID | 9136782 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | - |
|---|
| Start bp | 174836 |
|---|
| End bp | 176230 |
|---|
| Gene Length | 1395 bp |
|---|
| Protein Length | 464 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF1552 |
|---|
| Protein accession | YP_003628179 |
|---|
| Protein GI | 296120401 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTCATA CCTCCCGTTG GTCAATTCCT CGTCGCACGT TTTTGCGAGG TGCCGGTGTG
GCTGTGGCTT TGCCGTGGCT GGAAGCGATG GGTTCGCCTG TCAAAGCGGC TGAGTTGACG
ACCCCGGCAG ATGCACTTGA GGCGGGAAAG TATGCTCCTG TTCGATTTGG CTGCCTGTTC
TTCCCCAATG GTGTCTGGAA GGATGCCTGG ATTCCTAAAC AATCTGGGAA AGATTTCGAA
CTGCCCGATT CGTTGCAGCC GCTGACAAAC CTCAAAGAGC ACGTCACAAT TCTCTCTCAA
CTCGACAAGC GGCACAGCCA TGAAGGGGAT GGCCATTACG CGAAAACAGC CAACTTCCTC
ACAGGCCTGC GGGTCGAAAA AACCACCGGC AAAAACATCA GCACAGGTGG AGTTTCACTC
GATCAGTACA TGGCCAAGCA GGTGGGGCAT TTGACCCCAC TTCCGTCACT TGAATTAGGC
ATTGATCCCG TCATTTCCGG GATCGATTCG AATGTCGGTT ACACCCGACT TTATGGTTCG
CACATTTCGT GGCAGACAGC CGAACGACCC GTCGCCAAGG AAATCAATCC CAGAACAGTG
TTTGATCGGC TGATGAATGT CCAGCAGGCA GGGAAGAATC GCGGCCAGGC GGCTTCATCA
CGTGATGCAG ACCGCAAAAG CCTGCTCGAT TTCGCGATGT CCGATGCCCG GCGATTGCGG
CAACAGCTGG GCCGCGACGA CCAGTTCAAA CTCGATGAAT ATCTTGATTC TGTTCGTGCT
GTCGAAAAGC GGATCGAGTT TTTTACACAG CCTGATCCTC GAGTCTGGCA TCCAGAAACA
CCTCAGGCCG AAATGGAAGC CCCCGGGGCA CCTCGAGATT ATCAGGAGCA TGTCCGCCTG
ATGATCGACC TGATGATTCT GGCCTTCCAG ACCGATTCCA CGCGGGTTTC GAGCTTTATG
TTCGCCAATG ATGTTTCGGG TCATAACTTC TCGTTTGTCG ACGGTGTCCG CGGTTCGCAC
CATGAACTAT CGCATCACGA AGGCAAGCCC GAAAAGATCG AGCAGTACCA GAAGATCAAT
CGCTGGCATG TTTCGCAGTT CAGCCGGATG CTGGAGCGGA TGTCACAGAT TCGGGAAGGA
GAATCGACGT TGCTCGATAA CTCCATGATT CTTTTGGGAT GCGGCATGGC CGATGGCAAT
GCGCACCAGC CTGATAACCT GCCGATTGTC GTGGGTGGCC ATGCCGGTGG ACGATTTGCC
GGCGGGCAGC ATATTGCCAG TGCACCACGC ACTCCGCTGT GCAATCTGTA TGTTTCGATG
CTCGATGGCA TGGGCTGCCC CGTGAATCAG TTCGGCGACA GCACCGGCCC CATCAAGGAA
GTTTTTTCGG CTTAG
|
|---|
| Protein sequence | MPHTSRWSIP RRTFLRGAGV AVALPWLEAM GSPVKAAELT TPADALEAGK YAPVRFGCLF
FPNGVWKDAW IPKQSGKDFE LPDSLQPLTN LKEHVTILSQ LDKRHSHEGD GHYAKTANFL
TGLRVEKTTG KNISTGGVSL DQYMAKQVGH LTPLPSLELG IDPVISGIDS NVGYTRLYGS
HISWQTAERP VAKEINPRTV FDRLMNVQQA GKNRGQAASS RDADRKSLLD FAMSDARRLR
QQLGRDDQFK LDEYLDSVRA VEKRIEFFTQ PDPRVWHPET PQAEMEAPGA PRDYQEHVRL
MIDLMILAFQ TDSTRVSSFM FANDVSGHNF SFVDGVRGSH HELSHHEGKP EKIEQYQKIN
RWHVSQFSRM LERMSQIREG ESTLLDNSMI LLGCGMADGN AHQPDNLPIV VGGHAGGRFA
GGQHIASAPR TPLCNLYVSM LDGMGCPVNQ FGDSTGPIKE VFSA
|
|---|
| |