| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_0075 |
|---|
| Symbol | |
|---|
| ID | 9136728 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | - |
|---|
| Start bp | 97673 |
|---|
| End bp | 100711 |
|---|
| Gene Length | 3039 bp |
|---|
| Protein Length | 1012 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003628127 |
|---|
| Protein GI | 296120349 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGAAAA CCTGCTCTGA AGTTTATGTG CTGATTCCAT CGCATAGCCT CGAAGACTTT
CCACAGGATC TGGGAGAAGA GGCCGCAGGA AGCCTGCTGG AAGCTTTTGC CATCGCCTGG
CATCCGGCTC TATTGGCGAC AGCTGGTCGA ATTCCTCAGT GGTACCGTGC TGATGCTCCT
CCCGAACCCG CACCCGGGCA GCTGCTGATT CTTCCTCAAC CCTCCGAAGA CTGGTTTCCT
TACGACTGGC ATGAGCGATT GGAGCAAGCG GGGGCTGGCT TACTGAAAAC AGTCGCCCGG
CGAGAAGACA ATCTGCAGCA GCTCCAGGCG TGGCTCGAAT CCGATGCCGA CGATTCAGCC
CAGCCGAGCC TGTTCTTTCA GCCGGAAGCC AAAACCTCGA TCGACGATTT TCTGGCCTTC
GGAACCACAG TTCTGCAGTT GGAACTCCTC TCCCGACAGA TGCGGCACTT TAGCAGTCTG
GATGAAATCA TTCTGCAACA GCGAACTGTG GGAGCAGCCC GCTCGCTGGC TGCTGGTGAG
TTCTTGCCAT GCCGACAGCA ACTGGCCACT GCCTACGAAA ACCTGCTCGA AACACGCGAG
CGATTCTACC CCGGCGAAAT CTCGCTCTTC GACTTGTGCC TGGCACCTTC CGAGCTCGAT
ATGCCCCGGC TGAAAGCGGC TCTGAACGGC TTCACATGGC CGGTCAACGA ACCTTTAGGA
AACCAGCCAG CCGTCAACTT TCTGGCGGGT TCACTCGAAA CCTCTCCACT GCTGAAGCTG
GCTGACGAAC AATTGCCACT TGCGGCACCT CAGGAACTCA CAGCACCCTC AAACACTGCT
CCCACCACCA CTCTGAAGGA GTTATTGGCC CAGGGTGCTG TCGATGTTCT CGGTGGAGAG
GCTATCGAAC TTTGTACGCC GCTAATTTCG CCACAGATGT GGATCAGAAA CTTTCAACAA
GGCCATCTAC TCGCAAAAAC TCAACTGGGA ATAGTTCCCC GGGTGTTTGC CCGGCGGCTC
TTTGGGCTGG TGTCGCAACT TCCCGGTCTC CTCTCACAGA CGGGTTATGC GGGAGCGTTA
CATCTGCTGC TCGATGAAGG AACCTACCCG GATGAAGAGT TCAGCAGCTT CCGTTGGGAA
GGTACCAGTG GCGAGGCGGT AACGGCTTTC TCACGAATTC CACTCCCGGC ACAATCCGCA
GGGACTTTTT TGAGGCTGGC AACCCGACTG GGAGAGGCTC TTGATAGCGA TGGAAACCCG
GCTCTCGGTT TTGCTCGCTG GCCCGAAGTC GCGACTCCCT GGTTTCATGA TCTTCAGCGC
GCTGCCACTT TTGCCCCCGT CCTGGGCAAG TTTGTCACCT GCAAAGAATT TCTCGAGCGC
GTGGAATACC CCGACCATGT GCGGCAATAC CACGCGGGCG AATATCTTTC GTCGAGCTTG
GTTTATGCAG TCGCCGCTCG CGAGAAAAAC GCCATTTCGA GAGTCGCGAG TGCCTGGAAG
CTGCAAGGTC AACAGGCAGC CTGGCAGTTC TGCGAAGTGC AGCGTGCACT GCTTTCTCCA
AGTGAAAACC GCCAACAGCC TGTGCAGGGG ATCAAAAGTG GGGGTCAACG CTGGGAAGAT
GAACTTCTCG CCCACTTCCG CGTGATTGGT GCCAGTGACA ATCGTGCGAC CACGGATCAT
GCCGCAAATG CCGACGAGGA GTGGTCGGCA GAAACCGCAC TGCAGCAGAC CGCCCAGCAG
TTCGCGAATC TGCTCGGGTC AAAAATTCAA AATCACGAGG CTGCCGCAAG TCCTGCGGGA
ACTTTATTGA TCAATCCGCT TCCCTGGGCA CGCCCAGTTC CCGAAGAGAT GGAAGATGGG
ACCTTCCCCA CCATTCCACC GTGCGGCTAT CTCTGGCTCG CCCAAAACAC TCCAAATGGC
AAAAGTCCCG CACGCAAGAG CAAGCCTGTC GTCAAATTTA CCGAAGGTGT CCTCTCAAAC
GATCTCTTCG AGGTCGTTTT TCACCCACAA ACAGGAGGGA TCGCCCGGAT TCGTCGGCAT
GAGCAGCGCG AGAACCGACT GAGCCTGCAG CTGGCCCGCC GCTTTCCGCG TGAACGGGCC
ATTCGCCTCG GGCCAGATCC TGACGACGAA GTGATCAAGA CGGCTTACTC GGAGATGCGC
GCTGGTGAGT TATCGATTAT CGCCCTGACG AGTCATTCCC TCACGGTTCG ATCACTGGGA
GACCTCATTG ATCAGGCCAA AGGGGAACGC ATCTGCTACT ACAAACTCGA TGTCACGATT
CGTGCCGGTT CACTGAAGGT GGAGATCGAT CTGCAGTTTC TCGAACTGGC GGCCTTCGAT
GGCGACCCCT GGAACAACTA CATCGGCGCC CGCTTTGCGT TCGGCAGCGA GATGGCGGCC
ATATCCCGCT CGGTGCTGGG AAGCGTCCAT GTGGCGGGGA GCGAACGGTT TGAAGCTCCC
GAGTTTGTCG AAATCTGTGA TGGTTCCCTG CGGGCGACGA TTTTGCCGCA TGGCCGACCT
TACTTTCGCA AAACGGGCCC CCGCATGCTC GATGGCCTCA TGGTCGTTTC GGGCGAAACT
TCCCGCCGCT TCCGCTGGAC CATTGCCATT GATGATCCGC ATCCCGCACG GCTCGCGCAC
GAGGCGATGG TTCCTCTCGT GCGGCTGGAA AACGTCACCA GGCCCGCAAC AGGCGAGACG
TCTTTCTTCG TCCAATGCCC AGCCAAACAA GTGAGCATTC TGTCGTGGGA AGCGGGGATG
ACCGACTGGC CCATCGAAGC TCCAGCCGAT CCTTCAGACA CTGAAAGCGT CGATAGAGCA
GCGAAGGCAA CCGTATCGAA GAAGTCGTGC CGGGTGCGGC TGATGGAGAC CGAGGGGCAG
GCCAAGACCT TTTCGATGGT CTGGTATGCA CCACTGGCCG GGGCTCACAA GTTGACACTT
GGTGGAGCCC ATGCCGCGTG GTTGAAAACA ACGGGAAATG AATCCCGCGT GGCACTCAGT
GCCTATGAAG TCGCCGATAT TGAGTTTGTG TTTGAATGA
|
|---|
| Protein sequence | MTKTCSEVYV LIPSHSLEDF PQDLGEEAAG SLLEAFAIAW HPALLATAGR IPQWYRADAP
PEPAPGQLLI LPQPSEDWFP YDWHERLEQA GAGLLKTVAR REDNLQQLQA WLESDADDSA
QPSLFFQPEA KTSIDDFLAF GTTVLQLELL SRQMRHFSSL DEIILQQRTV GAARSLAAGE
FLPCRQQLAT AYENLLETRE RFYPGEISLF DLCLAPSELD MPRLKAALNG FTWPVNEPLG
NQPAVNFLAG SLETSPLLKL ADEQLPLAAP QELTAPSNTA PTTTLKELLA QGAVDVLGGE
AIELCTPLIS PQMWIRNFQQ GHLLAKTQLG IVPRVFARRL FGLVSQLPGL LSQTGYAGAL
HLLLDEGTYP DEEFSSFRWE GTSGEAVTAF SRIPLPAQSA GTFLRLATRL GEALDSDGNP
ALGFARWPEV ATPWFHDLQR AATFAPVLGK FVTCKEFLER VEYPDHVRQY HAGEYLSSSL
VYAVAAREKN AISRVASAWK LQGQQAAWQF CEVQRALLSP SENRQQPVQG IKSGGQRWED
ELLAHFRVIG ASDNRATTDH AANADEEWSA ETALQQTAQQ FANLLGSKIQ NHEAAASPAG
TLLINPLPWA RPVPEEMEDG TFPTIPPCGY LWLAQNTPNG KSPARKSKPV VKFTEGVLSN
DLFEVVFHPQ TGGIARIRRH EQRENRLSLQ LARRFPRERA IRLGPDPDDE VIKTAYSEMR
AGELSIIALT SHSLTVRSLG DLIDQAKGER ICYYKLDVTI RAGSLKVEID LQFLELAAFD
GDPWNNYIGA RFAFGSEMAA ISRSVLGSVH VAGSERFEAP EFVEICDGSL RATILPHGRP
YFRKTGPRML DGLMVVSGET SRRFRWTIAI DDPHPARLAH EAMVPLVRLE NVTRPATGET
SFFVQCPAKQ VSILSWEAGM TDWPIEAPAD PSDTESVDRA AKATVSKKSC RVRLMETEGQ
AKTFSMVWYA PLAGAHKLTL GGAHAAWLKT TGNESRVALS AYEVADIEFV FE
|
|---|
| |