Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_0066 |
Symbol | |
ID | 9136719 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 83756 |
End bp | 86404 |
Gene Length | 2649 bp |
Protein Length | 882 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | MMPL domain protein |
Protein accession | YP_003628118 |
Protein GI | 296120340 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.82197 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTCAAA GTCTCGGAAA TTGGATCACA CATCGCTGGT ACCTGGTGAT TGCGGGTTGG CTCTCACTCG TCATTACCAT GGCGATCGTG GCGCCCCCTC TCGATGATGT GATCACCACC GGTGAGTTTG CTTTTCTACC TGCGAACTTT CCCAGCCGGG TGGCTGAGGA TCTGTTTGCC AAGGCATTCC CGGCAGATAC TCAGCGCAGT GCCATCGTGC TGGTTGTCCG CCGTGTGGGC GAGAATCGTG AGCTGACGGA TCGAGATCTG CAGTTTGTCG ACGATGGGGT CGATTCCGAT GACCCGGATC GGGACAACGA ACTGCGGGAA CTATTGCTGA AAATTGCCGA TCAGTTTGGT GGTCTGGTCG GTCAACCTGA TGATGAGTCT GCTGAGTCAG GTTCCACCGA AGAATCCTCG ACCGACGCCA GCAAGACTGC GGCCAAAGGA AACGATGCGA ACGTTCCTCG GTCTTCCGAG AAGGCCGCTG TACCTGCCAA GCCCGCTGCG CCACTGGCAC CTCTCGGGTT GGGCAATTCG CAGATTACGG CTATCCGTAC CTACAAAGAC CCAAAGATCG GCAGGCTCTT GCGCAGTGAA GACCAGAAGG CCACTCTGGT GATGGTGGAA CTGACAAAAG ACTTCATGGA TGCCGCGAAC AAAAAAATTG TTCGTGCCGT GGAAGAACTT CTCTCCAGCC GGGACTTCAT GAAAATTGTC CCGCTAGGCC TGGATATCTC TTTAAGTGGT AACGCTGTTG TAGGCCGCGA CATGTTGGTG ACAGCCGATG CCAGCGCGAA GGCGACAGAG CTTTTAACCG TCGTGCTGGT GATCTTCCTG CTGATTGCGA TCTACCGGGC GCCACTCCTG GCAATCATTC CGCTCTTGAC GGTGTTTGTT TCTGTCGAGC TTTCGCTGTG CCTGTTGAGG CTTTTGGCTG ATTATCGGTT CGTGGTGCTG TTTCAGGAAA TCAAGCCTTA TGTCACCGTG CTGGTCTATG GTGCCGGTGT CGATTACTGC CTCTTCCTGA TTGCCCGCTA TAAAGAAGAG CTGGATGCAG GAGTCAATTA CGAAGATGCG ATTGCGAATT CTCTTGGTAA AGTCGGGGCG GCCATCACCG CCAGTGCCGG GACCGTGATC TGCGGCATTG CCATGATGAT CTTTGCTCAG TTCGTGAAGT TCCACGAAGC TGGCATCGCG ATTTCCACAG GGCTGATTAT CGTCCTGATG GCGTCATTAA CATTCACACC CGCGTTGTTG CGTGCTGCGG GCGCCTGGGC TTTCTGGCCG CAAATGAAAA GAGAACGTCC CTCCAGCACG ACGGGATGGT TACCGGCAGC CAGCCCGTTG AAAGCCTTTA CTGAAGCTCT AGGCGTCAAC CGCTTCTGGA CCAGACTGGC CGACACCATT CTTGAGAGGC CACTGACCAC ACTGCTGGTC AGCATTGCCG CGATGACTCC TTTTGCAATT GTGGGTCTAT TGTTCTTCTC GCATCTGAGT TACGGACTGC TCTCTGATCT CCCGGCGAAT TCGCCCAGTG TGCTGGGGAC CAAGGCTGTA CAGGAACATT TTCCCGCCGG TGCGACTGGG CCGGTCACTG TTCTGCTGAG AAACAACAAC ATCGACTTCT CTCAACGAAC AGGAGATACC CCAGGCGGGA TCGATGCCAT CAAAGAACTG ACGCTAGAAC TTCGCAAGCA TCTGGCTGAT GCACAACTGG CCGATATCCG CAGTGTCTCC CATCCCTTTG GTGGTGAAGA AGATCTGGAT TCGATCAAGC AGGTGGCTCG CCGCAAAATC ACGACCGATC GGTCGGTAAA ATTCTATGTG AGTAAAGAGC CAGGGTTTGA CGGGCATTTG ACGAGGCTCG ACATTACGAC GACAAACGAT CCGTTTGCCC GAGACAGTAT TGAGCAGTTG AGCAAGGTCG AACATCTCAT TCAACAAAGT CTGCCGGCGA TCCTGAAGGA TGGCACGACG ATCTATATTT CCGGTTCGAC CGCCAGTATT CGCGATCTGA AAACTGTGAC TGACAGCGAT CAGATCCGCA TTGATGTGCT GGTGATTTCG GGAGTCTTCC TCATTCTCGT CATCCTGCTC AGGCAACCGG CGATCTGCCT GTATCTGGTC ATCACGGTGC TGTTCAGTTA TCTGGCGACA CTCGGATTCA CCTATGCATT CTTCTGGGCG ATTGAACCTG ATTTTGCAGG ACTCGACTGG AAGGTGCCCA TGTTCCTGTT CACGATCCTG ATTGCCGTAG GTGAAGACTA CAACATCTTT CTCATGACTC GAATTGAGGA AGAGCAGCAC GAACATGGGC CTGTGGGTGG AGTGGTGCAT GCCCTCTCTC GCACTGGCCG TATCATTTCC AGTTGCGGCA TTATTATGGC AGGAACCTTT GCCTCGCTGA TGGCTGGTTC ACTCAAAGGG ATGACACAGT TGGGCTTTGC CCTCGCCTTT GGCGTATTGC TCGATACCTT CGTGGTGCGA ACAATTCTGG TTCCGGCCTA TCTGGTGATG CTGCATGGCG GACGTTTTGG TCGTCTGGGG CCGTGGATGG GAGCAAAGCC AGCGACTGAC AAATTCCCTG CACAAGCGAA AGGCGAAAAT TATGCAAATC CAGCAGAGTC GCCATCCAAT AGTGCTTAG
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Protein sequence | MFQSLGNWIT HRWYLVIAGW LSLVITMAIV APPLDDVITT GEFAFLPANF PSRVAEDLFA KAFPADTQRS AIVLVVRRVG ENRELTDRDL QFVDDGVDSD DPDRDNELRE LLLKIADQFG GLVGQPDDES AESGSTEESS TDASKTAAKG NDANVPRSSE KAAVPAKPAA PLAPLGLGNS QITAIRTYKD PKIGRLLRSE DQKATLVMVE LTKDFMDAAN KKIVRAVEEL LSSRDFMKIV PLGLDISLSG NAVVGRDMLV TADASAKATE LLTVVLVIFL LIAIYRAPLL AIIPLLTVFV SVELSLCLLR LLADYRFVVL FQEIKPYVTV LVYGAGVDYC LFLIARYKEE LDAGVNYEDA IANSLGKVGA AITASAGTVI CGIAMMIFAQ FVKFHEAGIA ISTGLIIVLM ASLTFTPALL RAAGAWAFWP QMKRERPSST TGWLPAASPL KAFTEALGVN RFWTRLADTI LERPLTTLLV SIAAMTPFAI VGLLFFSHLS YGLLSDLPAN SPSVLGTKAV QEHFPAGATG PVTVLLRNNN IDFSQRTGDT PGGIDAIKEL TLELRKHLAD AQLADIRSVS HPFGGEEDLD SIKQVARRKI TTDRSVKFYV SKEPGFDGHL TRLDITTTND PFARDSIEQL SKVEHLIQQS LPAILKDGTT IYISGSTASI RDLKTVTDSD QIRIDVLVIS GVFLILVILL RQPAICLYLV ITVLFSYLAT LGFTYAFFWA IEPDFAGLDW KVPMFLFTIL IAVGEDYNIF LMTRIEEEQH EHGPVGGVVH ALSRTGRIIS SCGIIMAGTF ASLMAGSLKG MTQLGFALAF GVLLDTFVVR TILVPAYLVM LHGGRFGRLG PWMGAKPATD KFPAQAKGEN YANPAESPSN SA
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