Gene Plim_0019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0019 
Symbol 
ID9136672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand+ 
Start bp24534 
End bp25226 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content54% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003628071 
Protein GI296120293 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.345545 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACCA TTGAGGCCAC CATATCTGCA GAAAATCTGC CTCAACCTGT GGAGCCTGGA 
TCGGCTGCAA AGGTTGAGGC AGATCATTTG CATCGTGGAA CCACTCTCGA TGAATCTAAT 
AGCGGGGCGA CCCTGGAAGC TCCGCGAGCG TTATCCATTC TGATGTCGTT TGCCTTCTGG 
ATTCTGCTGG CACTGGTGAG CCTCTCGTTT GCCACACTGG TGCTCTCTCC CAAGCTGCAT 
CGACGGGAAG TGCTTACAAA ACAGTATCAG CAGAGCCTTT GGGAATTGGT CATTCTCCAG 
GAACAGACGC GATCTCTCCG GGAAATTGCC AAGGCGCTGG AGCACGATGA GCGCTTTCAA 
GCGGAGCTGG CCCGTTCTCA ACTGGGTGGA ATTGGCAATA ACGAAGAGCG TTATCCACTT 
CCTGAAAATC TGCTATTGGC ATATCCCTTG GAACCACCTG CTCCCCAACT GCCAGTCCCA 
CCCGCGCAGA CATGGAGAGA GTTCTGGATC GAACGATTTG CCACAGATCA GACCTTACGG 
AGCGGTTTGA TCGTGTTTTG TGTAATCGGT TGCTTGTTTG GATTCGGCTG GCTGCATGAG 
GGAGCCTGGC ATCATTCACG TCTGCGGCCT GTGAGAACAT TGAGCCAGTG GATTGCTGTG 
CGCTATGCAC GCAGGGATCG ATCTGCCACG TGA
 
Protein sequence
MSTIEATISA ENLPQPVEPG SAAKVEADHL HRGTTLDESN SGATLEAPRA LSILMSFAFW 
ILLALVSLSF ATLVLSPKLH RREVLTKQYQ QSLWELVILQ EQTRSLREIA KALEHDERFQ 
AELARSQLGG IGNNEERYPL PENLLLAYPL EPPAPQLPVP PAQTWREFWI ERFATDQTLR 
SGLIVFCVIG CLFGFGWLHE GAWHHSRLRP VRTLSQWIAV RYARRDRSAT