| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_0012 |
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| Symbol | |
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| ID | 9136665 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 14413 |
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| End bp | 16122 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | Mur ligase middle domain protein |
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| Protein accession | YP_003628064 |
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| Protein GI | 296120286 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACCAATT CATCGCACAT CACCGAGAAA CTTCTGGCGA ATCCATGGGG AAAGCATGGT
TCGCCAGTCT GGATTCACCT GATCGGTGTT TGCGGCAGTG GTTTGCGCTC GTTGGCAGAG
TATCTGCTGG CCCGGGGTTT TTGTGTGACC GGTACCGATG AGCAACTGCC GACAGCCGGG
CTGAGTGAAC TGTTTCCACG AGGTCTGGTT TATACCCGCC AGAAAAACTT GCCCCGGGCT
GCCATTCATT CGCCAGACGC TACTGCGCTA GAGTCTGGCT TTTCCTTTCC CGAATTGTCG
CGACTCACTT CCAATCCGGA AAACAGGCTC CGTCAATCAA TCGCTGCTGT CCCTGATCTA
ATCATTCACA GTGCCGCAAT TCCGCCAGCG GATGCCGGCT TGCAGGCCGC CCGGCTGGCC
GGGATCCCGG CTATCCCTTA CCACATTGCG CTCGCTCACC TCATCAACTC CAGTCGCAGC
CTGTGCATTG CCGGTACTCA CGGGAAAAGC ACCACCACAG CCATGGTTGC CTGGATGCTC
TCCAGTTCGC TGGCACCTGA GATTACAGAT TCAATCGTAA ATACTAATCA TCCATGGCGA
GCATCCTTCA TTATGGGTGG AGAACTGATC GCACCTCTAC CTCTATCAAA GCCTGATCAG
GCCATGGCCA CCTTGCATAG ATCTGGCAGT TATGTTGAAG GGGACTGGCT GGTCGCTGAG
GCTTGCGAGT ACCGCCAGCA TTTCCTCGCT TACGAACCCG AACTTGCAGC AATACTTTCT
TGTGAGCCCG ATCACTTCGA TTGTTTTGCC AGCGAGGCCG AATTTGGCGA TGCTTTTTCG
AAATTTGCTG CCCGTGTGAA GCCAGATGGC AGGCTCGTCA CAGCGGCGGA TTCTCCAATG
GCACTTCAGG CGGCCGAGAA CGCGCAAGCA CAAGTCGAAA CGTTCGGCCT CTCGATGGGG
AATGCAAAAT ACCCTCACTG GCAGGCTCGC CAGATTCAAC GACTTGGTGC CAAGAGTCGG
TTTGAGTTGT TTTATTGCGG AAAACACCGG GCGAGCGTCC AATTACAGAT TCCCGGCAGG
CACAACATTC TCAACGCACT GGCAGCACTG GCTCTCACTG AGCAGACGGG TTGTCCACTA
CCGCATCGCA TCCAGGCACT TGCCAGCTTT CAAGGGATTC GCCGACGGTT CGAATGGAAG
GGCCTCTGGC GTGGTATCCA CCTGATCGAC GACTACGCAC ACCATCCGAC GGCTGTCATC
GAAACTTTGC GAACTGCCCG GCAGATCTTC GGCTCCCGGA GAATCGCTCT CGCTTTTGAA
CCTCATCAGG TTTCCCGCCT GCAGGCACTG CTCCCCGAGT TTGCTCAGTC ACTGGCTCTG
GCAGATCAGG TGTTCATTGC CCCGGTTTTT GCAGCCAGAG AAGGCAATTC CGCACTTAAG
CACACTTTGA TTCAAGACCT TGCCCAACGT GTCCGTTCGG CAGGAATTCC TACGGAAGTC
TGCGGCACAC TTGACCATCT GCGGTCATCC GTAGAGCATA AGGCGGGCAC AATCGATGTG
CTGATTACTG CGGGCGCTGG CCATATCGAC CGGATTCACT ATGAGCTTTC TCGAAGAATT
CCACGACATT CTCAAACGCG ACGAGCCACT GGCTCCTTAC ACCTGGATGA AACTGGGTGG
CCCGGTGCAG TACTTTCTCG AACCGCGTAG
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| Protein sequence | MTNSSHITEK LLANPWGKHG SPVWIHLIGV CGSGLRSLAE YLLARGFCVT GTDEQLPTAG
LSELFPRGLV YTRQKNLPRA AIHSPDATAL ESGFSFPELS RLTSNPENRL RQSIAAVPDL
IIHSAAIPPA DAGLQAARLA GIPAIPYHIA LAHLINSSRS LCIAGTHGKS TTTAMVAWML
SSSLAPEITD SIVNTNHPWR ASFIMGGELI APLPLSKPDQ AMATLHRSGS YVEGDWLVAE
ACEYRQHFLA YEPELAAILS CEPDHFDCFA SEAEFGDAFS KFAARVKPDG RLVTAADSPM
ALQAAENAQA QVETFGLSMG NAKYPHWQAR QIQRLGAKSR FELFYCGKHR ASVQLQIPGR
HNILNALAAL ALTEQTGCPL PHRIQALASF QGIRRRFEWK GLWRGIHLID DYAHHPTAVI
ETLRTARQIF GSRRIALAFE PHQVSRLQAL LPEFAQSLAL ADQVFIAPVF AAREGNSALK
HTLIQDLAQR VRSAGIPTEV CGTLDHLRSS VEHKAGTIDV LITAGAGHID RIHYELSRRI
PRHSQTRRAT GSLHLDETGW PGAVLSRTA
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