Gene Plim_0002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0002 
Symbol 
ID9136655 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp3189 
End bp4967 
Gene Length1779 bp 
Protein Length592 aa 
Translation table11 
GC content56% 
IMG OID 
ProductATP-binding region ATPase domain protein 
Protein accessionYP_003628054 
Protein GI296120276 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTCGAAT TGACTTCCAA ACGATGGCTC AGCATTCCCA ACTTATGGAA CAAGTTCGCT 
TCGCGGTCGA TTCGCGGCAG TCTCGTCGTC TGGGTCACGC TTTTGCTGGG CGCAGTGCTG
CTCTTCTTCG CCGTAGTGCT GTACGAAACC AATCGACGAT TAACAATCGA ACGCATCGAA
AGTGAGCTGA GATCGTTTGG CTTCTCGGTG CTGGCCAATG GCCGATTTGG CAATCGATTT
CCCACAACCG ATGGAGGAAA TCGAGGTGAT CGAGATCGCC ATGGGCGTGA TGGATTTGAA
CGGGATCGGC CGATTGGCGA ACCAGGCCCT CCCGGCACGA ACCCTCCTGA GCGAAATCCA
CTGGAAGCCG GTCGAGAGGC AGGGAATCCG CCTCAGCTAC TCCTGGCCGA CCAAATTCCC
TTGGAGCAAC CCGAGAGAAG AAATGATCGC AATGGACCCA ATCCACGGGG AGGGGGAAGG
AATGATTTTC CACCGGGAGA GCCTTTTCAG AGGAATGGCG GGCCGCCCGA CTTTGATCGT
CGTGGCCCCC CTGAGCGGAT GTATTTTTTT ATCCGCCGGG AAGATACTGG TGAGATCATC
GATCGGTCAT TTGATCTGCC CGAAGATGCA CTGGCTCCTT TTCCTGAATC GAAACTGCGA
GGCCCAGCCG CCATTCACGA TCCGACCCAA TCCCGCTCAG TGAATGGTCG CTGGGAAGTG
AAAATTTTCG ATCCCAGCCG GTCGCGTTCG ATTGTCGTGG GCCGGTGGAT TCAGCGCGAA
TGGGATGACT TGCAGCGTCT GCTGCTGCGA ACCGGCTTGA TCGCGCTCCT TTCGCTGATC
ATCGGTATTG CCGGGACATG GCTGCTGGCC AGGCGCGTGC TTTCCCCGCT CGACGATATC
TCCAAGACGG TCGATAAACT GACCGCCAGC ACACTCAATC AACGGATTGA CGTGGCCCCA
CTGAAAACGG AACTCCAGGC ACTGGCCGAA GTCCTGAATG CCACCTTTGA TCGATTGCAG
GCCGGCTTTG AACGGCAGGT TCGATTTACT TCGGATGCCT CGCACGAATT GCGGACGCCG
ATTGCTGTGG TCCTGGCACA AACGGAACAT GCACTGGCTC GCGAACGCTC TGCACAGGAA
TATCGTCAGG CACTGAGTGC CTGTGGTCGC TCTGCTTCCC GCATGCGCAC TCTGGTGGAA
AGTCTGCTGG CTCTGGCGAG AGCCGATTCG GGTCGATTAC AACTCAATTG TCAGCCCATC
GATCTGTTGC CGGTCGTGGA ACATGCGATT GAGTCGATCA AACCCAAAGC CGAAACCAGC
CAGTTAAAGC TGGCGGCGCA GCTCACTTCG GCCACTGTTT TTGGTGATGC TGTGTTTCTG
GGTCAGGTCG TTACGAACCT GCTCAACAAC GCGATTGAAT ACAATGCTCC CGAGGGGATG
ATCTTCGTCA CTCTTACCTC GGATACAGAC TCGGCCCGCA TCTCCGTCGT GGACACCGGA
CGTGGGATGT CGGCTGAAGA ACGTTCTCAT TTATTTGAAA GATTCTTCCG GGCGGATGCC
GCTCGTTCGG CGTCAGGTTC GACAGGCCAT GGCCTGGGCC TGGCCATCTG CCGAGAGATT
GTCGAGCTGC ATGGTGGAAA GATCGATGTC TCCACAGAAC TGGGTCGCGG CAGCACCTTT
TGTGTCGTGC TACCTCTGTA CCGCGAAGAA GCTGCAGAGG TCTCGACTGA AGTTGCAGCA
GATCCAGAGT TGAACAACTC TCTGACTTCA AGTGAATGA
 
Protein sequence
MVELTSKRWL SIPNLWNKFA SRSIRGSLVV WVTLLLGAVL LFFAVVLYET NRRLTIERIE 
SELRSFGFSV LANGRFGNRF PTTDGGNRGD RDRHGRDGFE RDRPIGEPGP PGTNPPERNP
LEAGREAGNP PQLLLADQIP LEQPERRNDR NGPNPRGGGR NDFPPGEPFQ RNGGPPDFDR
RGPPERMYFF IRREDTGEII DRSFDLPEDA LAPFPESKLR GPAAIHDPTQ SRSVNGRWEV
KIFDPSRSRS IVVGRWIQRE WDDLQRLLLR TGLIALLSLI IGIAGTWLLA RRVLSPLDDI
SKTVDKLTAS TLNQRIDVAP LKTELQALAE VLNATFDRLQ AGFERQVRFT SDASHELRTP
IAVVLAQTEH ALARERSAQE YRQALSACGR SASRMRTLVE SLLALARADS GRLQLNCQPI
DLLPVVEHAI ESIKPKAETS QLKLAAQLTS ATVFGDAVFL GQVVTNLLNN AIEYNAPEGM
IFVTLTSDTD SARISVVDTG RGMSAEERSH LFERFFRADA ARSASGSTGH GLGLAICREI
VELHGGKIDV STELGRGSTF CVVLPLYREE AAEVSTEVAA DPELNNSLTS SE