Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_3659 |
Symbol | |
ID | 5456284 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 3912563 |
End bp | 3913444 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640879243 |
Product | formamidopyrimidine-DNA glycosylase |
Protein accession | YP_001414914 |
Protein GI | 154254090 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 8.713719999999999e-21 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCGGAAC TTCCAGAAGT CGAGACTGTG CGCCGCGGCC TCGCCCCCGC GCTTGAAGGC CGCCGCATCG TCCATGTGAC GCAGCGCCGC CCCGATCTGC GGTTCCCACT GCCGGAACTT TTCGCGAAGC GGCTGACAGG ACGCCGCGTG ATCCGCCTGG AGCGCCGCGC GAAATACATT CTCGTCTATA TGGAACCTGC AAAATCCGGC GGCGCGGAAG ACGTGCTCAT CATGCATCTC GGCATGTCCG GCCGCTTCAC TGTGCATGGG CCAAGCGGCA GCTCCGCCCC CGGCCTCTTC CACCTCGGCA TGCCGGGCGG CGAAACCCAT GACCACATCG TTTTCGACAT GGAGGACGGC ACGCGCGTCG TCTATGCGGA TCATCGCCGC TTCGGCTTCA TGGATCTGGT CGCCGAGCCG GAACTCGCCT CGAGCCGCCA CCTCGCCGCC CTCGGTCCCG AACCCCTCGG CAATGAATTC TCAGCCCTCG TCCTCGCCGA AAGGCTGAAG GGCCGCCGCG CACCCATCAA ATCGGCACTG CTCGATCAGC GGACCGTCGC AGGCCTCGGC AATATCTACG TCTGCGAGGC CCTCTACCGC GCCGGCATCT CGCCCCTCCG CACCGCCGCC TCCATAGGCC CCGCCCGCGT CGAGCGCCTC ACCGCCGCCA TTCGCGCCGT CTTGCAGGAC GCGATTGCGG CCGGTGGCTC CACCTTGCGC GACTATGCGG CGACCGATGG CGAACTCGGC TATTTCCAGC ACGCCTTCGC CGTTTATGGC CGTGAAGGCG AAGCCTGTTC AAAGCCGGGC TGTGGCGGTA CCGTGAGGCG CATCGTGCAA TCGGCGCGAT CGACATTCTA TTGCCCCGCC TGCCAGCGAT AG
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Protein sequence | MPELPEVETV RRGLAPALEG RRIVHVTQRR PDLRFPLPEL FAKRLTGRRV IRLERRAKYI LVYMEPAKSG GAEDVLIMHL GMSGRFTVHG PSGSSAPGLF HLGMPGGETH DHIVFDMEDG TRVVYADHRR FGFMDLVAEP ELASSRHLAA LGPEPLGNEF SALVLAERLK GRRAPIKSAL LDQRTVAGLG NIYVCEALYR AGISPLRTAA SIGPARVERL TAAIRAVLQD AIAAGGSTLR DYAATDGELG YFQHAFAVYG REGEACSKPG CGGTVRRIVQ SARSTFYCPA CQR
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