Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_3621 |
Symbol | |
ID | 5454012 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 3876393 |
End bp | 3878066 |
Gene Length | 1674 bp |
Protein Length | 557 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640879205 |
Product | apolipoprotein N-acyltransferase |
Protein accession | YP_001414876 |
Protein GI | 154254052 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0815] Apolipoprotein N-acyltransferase |
TIGRFAM ID | [TIGR00546] apolipoprotein N-acyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGGGTTG AAAGCGGCCT TGCTGCCGCC GTCTATCGCG TTGAACGTGT CGCTGTCGCG CTGGCCGAGT TGCGTGGCTG GCGGCGCTAT CTGGCGGCGT TTGCTGCCGG CGCCGTCAGC GTGCTGGCCC TTCCGCCTTA TGATTTCTTG CCGGTTCTCT TCATCACCGT GCCTTTCCTC ATCTGGCTTC TGGATGGTGT AGGCGAGCCG ACGAGATCGC GCCGCCGCCG TGTTCTGTGG CGTGCGGGCG TCGTCGGCTG GTGGTTCGGC TTCGGCTATT TCCTTCTCGG GCTCTATTGG ATCGGTCATG CCTTTCTGGT CGAAGCGGAG AAGTTCGCCT TTCTGCTTCC CGTCGCCGTC ACTCTTCTGC CGGCGGGCCT CGCGCTTTTC ACGGGCGCCG CCGCGGCGCT TGCACGGCTC TTCTGGTTTC GCGGCTATCG GCGTGTCGTC GTGCTCGCGG TTTCCTGGAC GGTGCTGGAA TGGCTCCGTG GCCATATATT GACGGGCTTC CCGTGGAACC TGATCGGCGA AAGTTTCTCA GGCTCGGATG CGCTCATGCA GGCTGCGGCG CTTGTCGGCG CCTATGGCCT CTCTTTCATC GCGCTGCTGA TCGTCGGTTC GCCGGCTGCG TTCGATACGC GTGTCAGCCC AGCGCAGCGG GCCGTAGACG GCGAGCTTCT CACCGCGCCC TTGATTGCAT TGGCGGGTTT GGCGTTGATC TGGGTTGGAG GTGCCGCGCG CATTTCCTCG GCCGAGTTGA AATATGCCGA CGGCGTCAGC GTCAGGATCG TGCATCCGAA CACGCCTTTC GCCGACGATT GGGCGGATGA GAACCGTGTT CTCACCATCA TCGGGCAGCT TCTACGCATG TCGCGCGATC CGACGCCGGA ACGGCCTCGG GGCATCGACG GAAAGACGGT CGTCGTCTGG CCGGAGAATG CTGTGCCGGT GCTGCTTGCG CGCCAGCCCT ATGTTCTCTC CGCCATCGGC CGCGTCTTGC CCGAAGGCGC ACTGCTGATC GCCGGCTCCA ATCGCGGTGA GCCGGAACCT GGCGGTCCAT CGGACCGTTT GCGCGTCTTC TACAACAGCC TCTATGTCGT CGGTGCGGGC GGCGAAATCG TTGAAACCTA CGACAAGCAT CATCTCGTGC CTTTCGGGGA ATATGTGCCG CTGCGCCATT GGCTTGGCCG CATCGGTCTT CGCCAGCTCG TCCAGTTCCA GGGCAGTTTC GATGTCGGGC CGGGCCCGCG CACGCTGACA CTCCCGGGCC TGCCGCCGGT AAGTCCGCTT ATCTGCTACG AAGTCATTTT CCCTGGCGAG GTGGTTGCGC CCGGTCCCCG GCCGGATTGG ATGGTCAACA TCACGAATGA TGCCTGGTTC GGCGTCCATG CCGGTCCGAG CCAGCACTTC TCGCAAGTCC GCCTGCGTGC GGTGGAGCAG GGCCTGCCCC TTGTCCGCGC GGCGAACAGC GGCATTTCCG CCGTCATCGA CCCCTATGGC CGGGTATTGA AAAGTCTCCC CCTCGACAGG CGCGGCGTCA TCGACGCGGC CTTGCCCGCT CCCCTGCAGC CCACCCTCTA CGCCCGTCTC GGCGACTTCT TTCTGGCCTT CCTGCTGCTC GCGGCCTCCG CCGCCGCCTG GTACGGCCGG CCAAGGGTCA AAAGCCGCGC CTGA
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Protein sequence | MRVESGLAAA VYRVERVAVA LAELRGWRRY LAAFAAGAVS VLALPPYDFL PVLFITVPFL IWLLDGVGEP TRSRRRRVLW RAGVVGWWFG FGYFLLGLYW IGHAFLVEAE KFAFLLPVAV TLLPAGLALF TGAAAALARL FWFRGYRRVV VLAVSWTVLE WLRGHILTGF PWNLIGESFS GSDALMQAAA LVGAYGLSFI ALLIVGSPAA FDTRVSPAQR AVDGELLTAP LIALAGLALI WVGGAARISS AELKYADGVS VRIVHPNTPF ADDWADENRV LTIIGQLLRM SRDPTPERPR GIDGKTVVVW PENAVPVLLA RQPYVLSAIG RVLPEGALLI AGSNRGEPEP GGPSDRLRVF YNSLYVVGAG GEIVETYDKH HLVPFGEYVP LRHWLGRIGL RQLVQFQGSF DVGPGPRTLT LPGLPPVSPL ICYEVIFPGE VVAPGPRPDW MVNITNDAWF GVHAGPSQHF SQVRLRAVEQ GLPLVRAANS GISAVIDPYG RVLKSLPLDR RGVIDAALPA PLQPTLYARL GDFFLAFLLL AASAAAWYGR PRVKSRA
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