Gene Plav_3618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_3618 
Symbol 
ID5455155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3873838 
End bp3874866 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content62% 
IMG OID640879202 
ProductPhoH family protein 
Protein accessionYP_001414873 
Protein GI154254049 
COG category[T] Signal transduction mechanisms 
COG ID[COG1702] Phosphate starvation-inducible protein PhoH, predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCGCAA CAGGTGGAAT GAAGACATCG AACAAGGGCG AAGCGGGCGG CGTCGACAGT 
CTTGTCATTG CTTTTGACGA CAATCGTCTG CTGACCGAGC TTTTCGGGAC CAATGACAGA
AACCTCGCGC GCATCGAACA AGGTCTCGGC GTGCTTGCAA CCTCGCGGGG CAACAAGCTC
GTCATCACGG GCAATGCCCA TGCGCGCAAC CAGGCCGATC GCGTCCTCAA GGACCTCTAC
GCCCGGCTCA AATCCGGTCA GGAAGTGAAC ACCGGCGAAG TGGAAGGAGC GATCCGAATG
GCAACCGCAC CCGATGCCGA CCTCGCCCAG CCGCAAAGCG GCCTCGCGCG GCAGCAGATA
CAGACCAAGC GCCGCGTCAT CGGCCCGCGT TCGCAAACTC AAGGCACCTA TATCGACGCC
TTGATGTCGA ACGAACTCGT CTTCGGCGTT GGCCCCGCCG GCACCGGCAA AACCTATCTC
GCCGTCGCCG TCGCCGTTTC CATGCTGCTG CAGAAGCGCG TGGATCGCAT CATCCTGTCC
CGCCCCGCCG TCGAGGCGGG CGAACGTCTC GGCTTCCTGC CGGGCGACCT GAAGGAAAAG
ATCGACCCCT ATCTCCGTCC GCTTTACGAC GCCCTCTACG ACACACTGCC GGGCGAGCAG
GCGATGAAGG GCATCGAGTC CGGCGAAATC GAAGTCGCGC CGCTCGCCTT CATGCGCGGA
CGAACGCTCG CGAATTCCTT CGTCATTCTC GACGAGGCGC AGAACTGTAC ACCCGTGCAG
ATGAAGATGT TTCTGACCCG CCTCGGCGAA AACAGCCGCA TGGCGATTAC GGGCGATCCG
AGCCAAGTCG ACCTGCCGCT CGGCGCGAAG TCCGGCCTTC GCGATGCACT GGAAGTGCTC
GATGGCGTTC CCGGTTGTTC CACGGTTCAT TTTTCCGACG CCGACGTCGT GCGGCATCCG
CTCGTCACCC GCATCGTCAA GGCTTACAAT GCCCGCGAAC GTGGTCTTCT CGCGGAGGGC
ACTAGATGA
 
Protein sequence
MSATGGMKTS NKGEAGGVDS LVIAFDDNRL LTELFGTNDR NLARIEQGLG VLATSRGNKL 
VITGNAHARN QADRVLKDLY ARLKSGQEVN TGEVEGAIRM ATAPDADLAQ PQSGLARQQI
QTKRRVIGPR SQTQGTYIDA LMSNELVFGV GPAGTGKTYL AVAVAVSMLL QKRVDRIILS
RPAVEAGERL GFLPGDLKEK IDPYLRPLYD ALYDTLPGEQ AMKGIESGEI EVAPLAFMRG
RTLANSFVIL DEAQNCTPVQ MKMFLTRLGE NSRMAITGDP SQVDLPLGAK SGLRDALEVL
DGVPGCSTVH FSDADVVRHP LVTRIVKAYN ARERGLLAEG TR