Gene Plav_3610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_3610 
Symbol 
ID5454515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3867703 
End bp3868209 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content64% 
IMG OID640879194 
ProductUspA domain-containing protein 
Protein accessionYP_001414865 
Protein GI154254041 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAT CCGAAACACC GAGCCGCCCC GTCGCCCCGC CGAAAAGGCG CAAGTTTCTC 
GTCGTCGTTG ACGGCACACC TGAATCCGAG GTCGCGCTCC ATTTCGCAAG TCTCCGCGCC
AGCCACACAA GCGGCGTCGT CACGCTGCTC GCCGTCATCG AGCCGGGCGA GGCTTCGCAG
CAATGGCTCG GCGTTCAGAA CATCATGAAG GAAGAAGCGC GCGAGGAGGC GGAAGAGCTG
CTCCACAGGC TTGCCGCGCA TGTGAACGAA TATGCCGGCA TCATGCCCGA ACTGGTCATC
CGCGAAGGGC GCCGCGCCGA GCAGGTGATG CAGTTGATCG CCGAAGACAA GGATATCGCG
ATCCTCGTCC TCGCTGCCGG TCTCGGCAAG GAAGGGCCCG GCCCTCTCGT AACCATGGTC
GCGAGCGCCA GCGAAAAGGC CTTCCCGATC CCCGTCACCG TCGTGCCCGG TAACCTCACC
GAGGAAGCGA TCCGCACGCT GGCTTGA
 
Protein sequence
MSESETPSRP VAPPKRRKFL VVVDGTPESE VALHFASLRA SHTSGVVTLL AVIEPGEASQ 
QWLGVQNIMK EEAREEAEEL LHRLAAHVNE YAGIMPELVI REGRRAEQVM QLIAEDKDIA
ILVLAAGLGK EGPGPLVTMV ASASEKAFPI PVTVVPGNLT EEAIRTLA