Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_3598 |
Symbol | |
ID | 5453617 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 3846511 |
End bp | 3848775 |
Gene Length | 2265 bp |
Protein Length | 754 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640879182 |
Product | malic enzyme |
Protein accession | YP_001414853 |
Protein GI | 154254029 |
COG category | [C] Energy production and conversion |
COG ID | [COG0280] Phosphotransacetylase [COG0281] Malic enzyme |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 71 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCAAAA AGCGCCGTCA ATTTACCGAC GAGGAAGCGC TCCTCTTCCA TTCGCAGGGC AAGCCCGGGA AGCTCGAAAT CAACCCGACG AAGCCGATGG CGACGCAGCA CGACCTGTCG CTCGCCTACA GCCCCGGCGT TGCGGTGCCG GTGCGCGCGA TCGCGGAGAA CCCGGACGCG GCTTACGAAT ATACGACCAA GGGCAATCTC GTCGCGGTGA TCTCGAACGG CACGGCGATC CTCGGGCTCG GCGATCTCGG CGCGCTCGCC TCGAAGCCGG TGATGGAAGG CAAGGCCGTC CTCTTCAAAC GCTTCGCGGA TGTCGATTCC ATCGATCTCG AGATCGATAC CAAGGATGTC GACGCCTTCA TCAATTCGGT GCGCTATCTG GGCCCGTCCT TCGGCGGCAT CAACCTTGAA GACATTTCGG CGCCGGACTG CTTCGTGATC GAAAGCCGGT TGCGTGAGCT CATGGATATT CCGGTCTTCC ATGACGACCA GCACGGGACC GCGATCATCA CCGCTGCCGG GCTCATCAAC GCGCTCTTCC TTACCGGGCG CGACATCAAG GACATCAAGG TCGTCGTCAA CGGCGCGGGC TCGGCGGGCA TTGCCTGCCT CGAACTCATC AAGGCGATGG GGCTGCCGCA TGACAACGCC ATTCTCTGCG ACACCAAGGG CGTGATCTAC AAGGGCCGCA CCGAGGGCAT GAACCAGTGG AAGTCGGCGC ATGCGGCGAC GACCGACGCG CGGACGCTGG AAGAAGCGAT GGTGGGCTGC GACGTGTTCC TCGGCCTGTC GGCCAAGGGC GCGATCAACG CCAAGATGGT GGCGTCGATG GCGCCGAAGC CGATCATCTT CGCGATGGCG AACCCCGATC CCGAGATCAC GCCGGAAGAA GTGGCGCTGG TGCGCGACGA CGCCATCACC GCGACAGGAC GCAGCGACTA TGCGAACCAG GTGAACAATG TTCTCGGCTT TCCCTATATC TTCCGCGGCG CGCTCGATGT GCGCGCGAGC GCGATCAACG AGGACATGAA GATCGCCTGC GCCGAAGCTC TGGCGAAGCT TGCGCGCGAG GATGTGCCGG ACGAAGTGGC GGCGGCCTAT CAGGGCGAGC GTCCGCGCTT CGGCCCGCAA TACATCATTC CCGTGCCGTT CGACCCGCGC CTCATCCGCG AAATTCCGCC GGCGGTGGCG AAGGCGGCGA TGGATTCCGG CGTTGCGCGG GCGCCCATCG TCGACATGGA AGCCTACAAG AACCGCCTGT CGGCGCGGCT CAACCCGACG GCGGGCACGC TGCAGGTGAT CGTGGACAAG GTGCGGCGCG ACCCGAAGCG CGTCGTCTTT GCCGAGGGCG AGGAAGAGCG CGTGATCCGC GCGGCGCTTG CCTTCCGCGA TGCGGGGCTT GGCCACCCGA TCCTTGTCGG CCGCGACGAA CAAGTGCGCG AGACGCTGAA GCAGATCGGC CTCGACCCGA AGACCGACCT CGACATCCGC AACGCACGGA CCTCCGACAA GGTCGATTCG TATACGGAGT TTCTCTACAA GAAGCAGCAG CGCAACGGCT ATCTCTATCG CGACTGCCAC CGGCTGGTGA GCAACGACCG CAACATCTTC TCGGCCGTGA TGCTGGAACT GGGCGATGCC GACGCGCTGG TGACGGGCGT GACGCGGACC TATTCGGTGG CGCTGGAAGA AGTGCGCCGG GTGATCGACG CCGTCGACCA TCGCCGTCCG ATCGGCGTGA CGCTGGTCGT TGCGGGCGGG CGCACGGTGC TTGTGGCCGA TACGAACGTG CATGAGATGC CGACCGGCGA AGAGCTTGCC GACATCGCGA CGCAGGCGGC GGAAGTGGCG CGGCGGCTCG GCTATGAACC GCGCGTGGCG ATGCTCGCCA ATTCGAGCTT CGGCACGCAT GCGCATGAAC GGCCCTCGAC CGTGCGCGAC GCGGTGCGCA TTCTCGACGA GCGGCAGGTC GATTTCGAAT ATGACGGCGA GATGGCGGCC GATGTCGCGC TCAATCGCGA GACGATGGCG CTTTATCCGT TCTGCCGGCT GAGCGACACG GCGAATGTGC TCGTGATGCC CGCGATCCAT GCGGCGTCGA TCTCGACCAA GCTTCTGCGC GTGCTGGGCG GCTCGACGCT GATCGGGCCG CTCCTCGTCG GCCTCAAGCG GCCGGTGCAG ATCGTGCCGA TGACGGCGAC GGTTTCCGAC CTCGTGAACA TGGCGGCGCT GGCGGCTTAC GATCTTTATC GCTGA
|
Protein sequence | MSKKRRQFTD EEALLFHSQG KPGKLEINPT KPMATQHDLS LAYSPGVAVP VRAIAENPDA AYEYTTKGNL VAVISNGTAI LGLGDLGALA SKPVMEGKAV LFKRFADVDS IDLEIDTKDV DAFINSVRYL GPSFGGINLE DISAPDCFVI ESRLRELMDI PVFHDDQHGT AIITAAGLIN ALFLTGRDIK DIKVVVNGAG SAGIACLELI KAMGLPHDNA ILCDTKGVIY KGRTEGMNQW KSAHAATTDA RTLEEAMVGC DVFLGLSAKG AINAKMVASM APKPIIFAMA NPDPEITPEE VALVRDDAIT ATGRSDYANQ VNNVLGFPYI FRGALDVRAS AINEDMKIAC AEALAKLARE DVPDEVAAAY QGERPRFGPQ YIIPVPFDPR LIREIPPAVA KAAMDSGVAR APIVDMEAYK NRLSARLNPT AGTLQVIVDK VRRDPKRVVF AEGEEERVIR AALAFRDAGL GHPILVGRDE QVRETLKQIG LDPKTDLDIR NARTSDKVDS YTEFLYKKQQ RNGYLYRDCH RLVSNDRNIF SAVMLELGDA DALVTGVTRT YSVALEEVRR VIDAVDHRRP IGVTLVVAGG RTVLVADTNV HEMPTGEELA DIATQAAEVA RRLGYEPRVA MLANSSFGTH AHERPSTVRD AVRILDERQV DFEYDGEMAA DVALNRETMA LYPFCRLSDT ANVLVMPAIH AASISTKLLR VLGGSTLIGP LLVGLKRPVQ IVPMTATVSD LVNMAALAAY DLYR
|
| |