Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_3597 |
Symbol | |
ID | 5454060 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 3845473 |
End bp | 3846498 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640879181 |
Product | hypothetical protein |
Protein accession | YP_001414852 |
Protein GI | 154254028 |
COG category | [R] General function prediction only |
COG ID | [COG3176] Putative hemolysin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.485263 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 68 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGTTC GAGAGCTTCC CCCGCTGGAT CGAGGGGCAG TCACGGGCGC GAAGGGGGAA GTTGTGGCGC CCGGCGGGTG GCGACAGGTC TCGTATGCCG GTGTTGGTGC AGGTAAAGGT TCGGGTTCCG CGATAATGAA TGCCAGAGAG ATGGGCCGGA GCGTCGATCC GCTGGCGGCG ACCGCTGCCG CCGACCGATT GAGCTATGGC CGCAAGGGCG CGCTCGAAGT GCGGCTTGCG CGTTCGGCGC CGGAGATAGA CGCCGCCCAG TCGGTCCGCT ACCGCGTCTT CTATGAGGAA ATGTCGGCCA AGCCGGATGC CGAAACCCGC GCCCGCAAGC GTGACTTCGA CCGCTTCGAC GATATTTGCG ACCATCTTCT CGTGGTCGAT CATTCGCTCG CGCCGGCGGG CGAGGGCGCA GGCGGCGATC TGCCGCCCGA AGCCGTTGTC GGCTGCTACC GGCTGCTCCG CCAGGAAGTG GCGGAGCGGG AAGGCGGCTT CTACACCGCC AGCGAATTCG ACATCGCGCC GCTGCTCGCG CGCCATTCGG GCCTGAATTT CCTGGAGCTT GGCCGCTCCT GTGTGCTGAA GCCCTATCGC AACAAGCCGA CGGTCGAGCT TCTGTGGCAC GGCATCATGC ATTACGTCAC CGAGCACAAG CTCGATGTGA TGTTCGGCTG CGCGAGCTTC GAGGGCACGA ACCCGGACGC GCTCGCCGCG CCGCTTTCCT ACCTCGCCCA TAATCATGCC GCGCCGGATG ACTGGAAGGT CCGCGCGCTG CCCGAGCGTT ATGTGGAGAT GAACCGCATG GCGAAGGAAG ACATCGACCC GCGCGAGGCG CTGCGCGCGC TGCCGCCGAT GATAAAGGGC TATCTCCGTG CCGGCTGCTA TATCGGCGAA GGCGCGGTGA TCGACCACCA GTTCGGCACC ACCGACGTGC TGATCCTCTT CCCCGTCGCC CAGATCTCCG ACCGCTATCT GTCGAAGTTC AGCGTCAAAT ACGGAACGCC GAACGGCAAA GCCTGA
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Protein sequence | MAVRELPPLD RGAVTGAKGE VVAPGGWRQV SYAGVGAGKG SGSAIMNARE MGRSVDPLAA TAAADRLSYG RKGALEVRLA RSAPEIDAAQ SVRYRVFYEE MSAKPDAETR ARKRDFDRFD DICDHLLVVD HSLAPAGEGA GGDLPPEAVV GCYRLLRQEV AEREGGFYTA SEFDIAPLLA RHSGLNFLEL GRSCVLKPYR NKPTVELLWH GIMHYVTEHK LDVMFGCASF EGTNPDALAA PLSYLAHNHA APDDWKVRAL PERYVEMNRM AKEDIDPREA LRALPPMIKG YLRAGCYIGE GAVIDHQFGT TDVLILFPVA QISDRYLSKF SVKYGTPNGK A
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