Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_3585 |
Symbol | |
ID | 5456490 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 3832488 |
End bp | 3833363 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640879169 |
Product | uroporphyrin-III C/tetrapyrrole methyltransferase |
Protein accession | YP_001414840 |
Protein GI | 154254016 |
COG category | [R] General function prediction only |
COG ID | [COG0313] Predicted methyltransferases |
TIGRFAM ID | [TIGR00096] probable S-adenosylmethionine-dependent methyltransferase, YraL family |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 89 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGAAAG AAGACGACAA GCGGCAAAAG CTCGCCCCGC GCCTCGCATC CGGCCTTTAT GTCACCGCCA CGCCCATCGG CAATGCAGGC GACATCAGCC TCCGCGCGCT CGATGTTCTC GGCCGCGCCG ATCTCGTTCT CTGTGAGGAT ACCCGCGTGA CCGCGAAGCT CTTCGCCATC CACGGTATCA AGGTAAAGAC CGCGCCCTAT CACGATCACA ACGCCGCCGA GATGCGGCCC CGCGTGCTGA GGCGCCTCGA AGCGGGCGAG GCCGTCGCCC TGGTTTCCGA TGCCGGCACG CCGCTCGTCT CCGATCCGGG CCTGAAGCTC GTGCAGGAGG CGGTGGCGGG CGGCCATGCC GTCACGGCGC TGCCCGGCGC TTCCTCCGTG CTGGCGGCCC TGACGTTGGC AGGCCTCCCA ACCGACCGGT TTTTCTTTGC CGGCTTCCTG CCGGTGAAGC AGGAAGCGCG CCGAAAGGAA CTGGCGGAAC TCGCCGCCAT CCCCTCCACC CTCGTCTTTC TGGAAAGCGC GAACCGCCTC GCCGCTTCCC TCGGCGACAT GGCGGCGACG CTCGGCAATC GCGAAGCCGC TGTCGCCCGC GAACTGACGA AGCGCTTCGA GGAAGTGCGG CGCGGCTCCC TTGGCGAGCT TGCCGCGCAT TATGAAGAGG CCGGCGCGCC GAAAGGTGAG GTCGTCGTCG TCGTCGGTCC GCCCGAAAAG CGCGCCGCGC TCTGCGCCCA TGAGGTGGAT GCAATGCTCG AAAACGCGCT CGCTCGCACC TCCCTCAAGG ATGCCGTCGC CGAGATCGTT GCGATGACCG GGCTGCCGCG CCGCGAAATC TACGCCCGCG CGCTTGAACT CTCGGGTGCG AAGTGA
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Protein sequence | MEKEDDKRQK LAPRLASGLY VTATPIGNAG DISLRALDVL GRADLVLCED TRVTAKLFAI HGIKVKTAPY HDHNAAEMRP RVLRRLEAGE AVALVSDAGT PLVSDPGLKL VQEAVAGGHA VTALPGASSV LAALTLAGLP TDRFFFAGFL PVKQEARRKE LAELAAIPST LVFLESANRL AASLGDMAAT LGNREAAVAR ELTKRFEEVR RGSLGELAAH YEEAGAPKGE VVVVVGPPEK RAALCAHEVD AMLENALART SLKDAVAEIV AMTGLPRREI YARALELSGA K
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