Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_3579 |
Symbol | hrcA |
ID | 5457033 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 3826744 |
End bp | 3827808 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640879163 |
Product | heat-inducible transcription repressor |
Protein accession | YP_001414834 |
Protein GI | 154254010 |
COG category | [K] Transcription |
COG ID | [COG1420] Transcriptional regulator of heat shock gene |
TIGRFAM ID | [TIGR00331] heat shock gene repressor HrcA |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.621722 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 94 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTGGCG TAATGGATCT CAACGAGCGT TCGCGCGAGA TCCTGCGGCG CGTGGTCGAA ACCTATCTGG AGACGGGGGA GCCGGTGGGC TCGCGGTTCC TGTCCCGGCA ATTGCCATTG TCGCTCTCCG CCGCCTCGAT CCGCAACGTC ATGTCGGATC TGGAGGGGCT CGGGCTTATT TTCGCACCGC ATACCAGCGC CGGCCGGATG CCGACCGAGG CAGGCCTTCG CATGTTCGTG GACGGGTTGC TCGAAATCGG CGATCTCACG GATGATGAGC GCATTGCGAT CGAGCGGCAG GTTTCGGGCT CCCACAAGAG CATCGAGGAT GTGCTGGACG AGGCCTCGAA ACTCCTCTCC GGCCTCAGCC ATGGCGCTGG TTTCGTGGTC GCGCCGACCT ATGACGCGGC GCTCAAACAC GTCGAATTCG TGCCGATCGA CGCGGAGCGG GCGCTCGTGG TGATCGTGAC GGAAGGCGGC GCGGTCGAAA ATCGCGTGAT TGAAATCCCC AAGGGCCTGA CGCCTTCGGC GCTGGCCGAG GCGACCAATT ATCTCAACGC GCAATTGCGC GGGCGGACGC TGGACGAGGC GAAGGCCCAT CTGGCGCGCG AACTGGAAAC GCAGAAGGCG GAGCTGAACG AGCTCACAGC CAAGGTGATC GAAGCGGGGC TGGCCACCTG GTCGGGTTCC AATTCGGCGG CCGCCAACAA TGATCCGCTG GGCAAGTCGC TGATCGTGCG GGGACGCTCG CGGCTTCTGG AGGATGTGCA TGCGGTCGAA GACCTCGAAC GCATCCGGCT TCTGTTCGAC GAACTCGAGA ACAAGCGCGA TCTCGTGCAG CTGCTCGGGC TGGCTGAGGC GGCGGACGGG GTCCGCATTT TCATCGGCTC GGAGAACAAG CTATTCTCAC TATCGGGCTC CTCGCTGATC GTGAGCCCCT ATATGGACAC GCAGCAGCGC GTGGTCGGCG TGCTCGGCGT GATCGGCCCG ACACGGCTCA ATTATGCCCG CGTGATCCCG ATGGTCGATT ACACGGCAAA GCTGGTGGGA CGGCTTATCA ACTGA
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Protein sequence | MVGVMDLNER SREILRRVVE TYLETGEPVG SRFLSRQLPL SLSAASIRNV MSDLEGLGLI FAPHTSAGRM PTEAGLRMFV DGLLEIGDLT DDERIAIERQ VSGSHKSIED VLDEASKLLS GLSHGAGFVV APTYDAALKH VEFVPIDAER ALVVIVTEGG AVENRVIEIP KGLTPSALAE ATNYLNAQLR GRTLDEAKAH LARELETQKA ELNELTAKVI EAGLATWSGS NSAAANNDPL GKSLIVRGRS RLLEDVHAVE DLERIRLLFD ELENKRDLVQ LLGLAEAADG VRIFIGSENK LFSLSGSSLI VSPYMDTQQR VVGVLGVIGP TRLNYARVIP MVDYTAKLVG RLIN
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