Gene Plav_3551 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_3551 
Symbol 
ID5454072 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3795019 
End bp3795258 
Gene Length240 bp 
Protein Length79 aa 
Translation table11 
GC content64% 
IMG OID640879135 
Producthypothetical protein 
Protein accessionYP_001414806 
Protein GI154253982 
COG category[S] Function unknown 
COG ID[COG5639] Uncharacterized conserved small protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.708415 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAAAT TGAAGCTCGG CCCGATCACC GAGGAAAAGC CGGTGAAGGC GACGCTGGAA 
CTGCCCGCAT CGCTTCACCG GGATCTCGCG GCATATGCCG AGCTGCTGGG AAGGCAGACC
GGCCAGCCTG TGCGCGATCC CGTGAAGCTG ATCGTACCGA TGCTGGAGCG CTTCATCGCC
ACCGATCGCG GGTTCGCCAA GGCCCGACGC GCGAAGCCCG CGGGCGATGC CAGTTCATAA
 
Protein sequence
MTKLKLGPIT EEKPVKATLE LPASLHRDLA AYAELLGRQT GQPVRDPVKL IVPMLERFIA 
TDRGFAKARR AKPAGDASS