Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_3493 |
Symbol | |
ID | 5453906 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 3740609 |
End bp | 3741994 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640879078 |
Product | Pyrrolo-quinoline quinone |
Protein accession | YP_001414749 |
Protein GI | 154253925 |
COG category | [S] Function unknown |
COG ID | [COG1520] FOG: WD40-like repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 0.546086 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACGG AATTCATGCC GGCTGAGAAC GCGAAAGCCG GATCGGCAAT CGGATCGGCC CTTCGTATCG CACTGCTCGG CCTTGTCGTC ATCGGCCTCG CCGGTTGCGA CACCGTGGGC AACATGTTCT CGTCCGATGA CAACAAGACG GTGCTTCCCG GCAAGCGCCT CTCCGTCATG GAGCTGGGTG CGGCCCTCGA AGTGGACCCG GAAATCGCCG ACGAAGCGGT CGTGTTGCCG CAGCCTTACG TCAACGAAGC CTGGCCTCAG CCGGGCGGCA CAGCCGACAA TGTGATGCAC CATCTCGCGG CGCCCGGCTC GCTTCAGCGC ATTTGGTCGG TCGATGCCGG TGCCGGCTCC GGCCGCGTCG CGCAGCTCGT TGCGTCGCCG GTCATCGCCG ATGGCAAGAT TTTCGTTCTC GATGCCGAAA CGAATGTCCG CGCTTTCGAT CAGGCGACGG GAAAGCGTCT TTGGGCCGCA GAGCTCGTCC CCGATGGGGA AGACGGCAGG GAAGGGCGCG GCGGCGGCGT TGCCTTCGAT GGCGGCCGCG TCTTCGTGGT AACCGGCTTC GGCACTGCCT TCGCGCTCGA TGCGGCGGCC GGCACGGTGA TATGGACCCA GAAGCTGGGC GAGCCCTTCC GCGCCGCGCC GACGGCGAAT GGCGGCCGCG TCTTCGCCAT CACCTCCGAC AATCAGATGA TCGCCTTCGC GCAGGAAACC GGCGACGTGC TATGGCGCCA TCGCGGCATC GCCGAAAGCG CTGGCATCCT CAGCTCCACC AGCCCCGCCG TTGCAGGCGC AATCGTCATC GCGCCCTATT CGTCGGGCGA GCTGGTCGCG CTGCGCGTGG AAAACGGCAG CCCCGTCTGG AGCGACTCTC TCACCCGCAC GGGCAACGTC ACCTCGCTGG GTGAGTTGAA CGACATCGCC GGCCGTCCGG TCATCGACCG TGGCCGCGTC TTCGCCATCA GCCATTCGGG CCGCATGGTC TCGATCGACC TGCGCACCGG CGAACGCGTC TGGACGCGTG AGATCGGTGG CGTGCAGACG CCGTGGCTCG CGGGCGATTT CATCTTCCTC GTCACGAACA ATCAGGAAGT CCTGGCGATT TCCCGTCGCG ACGGGCGCAT CCGCTGGATC ACGCCGCTGC CGCGCTTCGA GGACCCGGAA GACAGGGAAG GGCCGATTGA ATGGTCGGGC CCGGTTCTCG TCAGCGATCG CCTGGTGCTC GTCTCGTCGG AAGGAGACGC AGTCTCGATT TCGCCCTATA CAGGCGAAAT GCTGGGACGC ATCGACTTGC CGCGCGGTAC GTTGATTGCG CCGGTCGTCG CAAATGAAAC GCTCTATATT CTGACGCGCA ACGCCGAGCT CGTTGCCCTG AAATAG
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Protein sequence | MTTEFMPAEN AKAGSAIGSA LRIALLGLVV IGLAGCDTVG NMFSSDDNKT VLPGKRLSVM ELGAALEVDP EIADEAVVLP QPYVNEAWPQ PGGTADNVMH HLAAPGSLQR IWSVDAGAGS GRVAQLVASP VIADGKIFVL DAETNVRAFD QATGKRLWAA ELVPDGEDGR EGRGGGVAFD GGRVFVVTGF GTAFALDAAA GTVIWTQKLG EPFRAAPTAN GGRVFAITSD NQMIAFAQET GDVLWRHRGI AESAGILSST SPAVAGAIVI APYSSGELVA LRVENGSPVW SDSLTRTGNV TSLGELNDIA GRPVIDRGRV FAISHSGRMV SIDLRTGERV WTREIGGVQT PWLAGDFIFL VTNNQEVLAI SRRDGRIRWI TPLPRFEDPE DREGPIEWSG PVLVSDRLVL VSSEGDAVSI SPYTGEMLGR IDLPRGTLIA PVVANETLYI LTRNAELVAL K
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