Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_3481 |
Symbol | |
ID | 5455563 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 3725685 |
End bp | 3727799 |
Gene Length | 2115 bp |
Protein Length | 704 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640879066 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001414737 |
Protein GI | 154253913 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 0.112139 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCGGA CCTCGATCAG ACACAAGCCG ATGATTGGCA TGGCGGCCTT TCTCCTTGCC TGTCTTTTGG CTTGGGCCGC GCCGCTGCCC GCATCGGGCG AAACCGTCCT GCGGCCGCCA TCCGCCGCCG GCCTCGCCAA TGGCGATCCT CTGATGCTGG AGGAAGGCTG GACCGTCTAT CGCGACGCCC TTGTGCCTGC GGCGCGCTTC GGCGGCGGCT GCTCCCTCTC CTTCGCAGGT CTCGAAGCCG AGCACGTGAC ACTTCCCGAT ATCTGGGGCC CCGCGCTCAC CACCCGCGTT TCCACAGGCC ACGGCACCGC CACCTATTGC CTCGATCTCG CCCTGCCGCA AACCTCGCAG GCGCTGGCCC TCTCCCTCGG CACCACGCGC TCCGTCTACG CGATCTATGC CGTCTCGAGA GGACGCTATG GCGAGTTGGA AGTGCAGTCC CTGCACCGCA ATGGCGATCC GTCGCGCGCG GAAGGCATCG TTGCCGTCAA CCCGACCGCG CCCGTCATCC CGCTGCCCCA CGATCTCCGG CAGTTCCGCC TCGTCGTGCA GCTCGCCAAT TACGTTCACA AGCAGGGCGG CATCGTCGAC GTGCCCTCGA TCGGCTTCCT GCAAAAAATG GATTCCGCCG AGCGCCGCGC CAGCGCGCTG CCGACGGCGC TCGCACTTGT CCTCGTCCTT GTCGCGATCC TCACGCTCGT CGTCGGCCGT TCCACCAGCA ACCCGCGCGG CCATCTGATC TTCGCCGCCC TCTGCGCCAC CTCGGCGCTT CGTGTCGTCC TTGTCAGCAA TCTCATCTGG GACTATCTGC CCTCCTTCCC GGAAGCGCGC AAATACGACC TCGAATATTT CTCGCTCTTC CTTGTCGCCC CCGCTTACTA CGCTTTCATC TGCTATCTCT TCCGCGAGGG CAGGGTGGTC TGGGTCGACA AGCTGATCTA TGGCGTCTCG GCCGTCTTCT GCCTTTTCGC CCTTCTTGTC GCGCCCTTCA TGGCGCCGGG CACCGTCACG CTGCTGCGCG AGCCGTTCCA GCTTCTCTGG GCCGTCATCA TCCTCGCCGT CGGCGTCACG ATCCTCCGTA CGCTGCTGAT GGAAAAGGAA GCGCGCCGCG ATGCGCTCGC CGTCCTTCTC GCCGCCATGG TCTATTTCGC CTACGAAGTG CTGACGAGCA TGAAGATCAT CGGCGCCTCG ATGGAGCTGT CGAACCTTCT CATCGTCTTC GTCACCATGC TCCACATCCG CGCCTTCATG CTGAAATACC GCCGCGTGGA GGGCGAGCGC GACACCCTCC ACCGGACCCT GCGCGATGCG AACGCCGTTC TCGAGGCGCG CGCCGACGAG CTCACCCGCG CCCTCATGGC CGCCGAACAG GCATCCCTCG CCAAATCCGA ATTCCTCGCC ACCATGAGCC ACGAGCTCCG CACGCCCCTG AACGCCATTA TCGGCTTTTC CGAAACTATG AAGCTCGAAG TCTTCGGCCC TCTCGGCCAC GGCAAATATG CGGAATATGC GAAGGACATC AACAATTCGG GCACCCATCT TCTCGATCTC GTCAGCGACA TCCTCGACAT CTCCCGCGTC GAATCCGGCA CCGATGCGCT CAACGAAGAG GAAGTCTGCA TCGAAAGCGT GGCAAGGGCG GTGCTCGCCG CCACCGCCGC TCAGGCCGGT AAGGCGGAAG TCGTCTGCCG CCTCGATGCG GATGCCGGCC TCCCGCCGGT CTTCGCCGAC GAGCGCAAGA TCAGGCAGAT ACTGACGAAC CTCGTCGGCA ACGCGATCAA GTTCAATGTC CCCGGCGGCA CGGTCGCGGT CACGCTCGCG CGGGACGAGA GCGGCTACCG CATCGCCGTC GCCGACACCG GCATCGGCAT CGTCGCCGAA GACATCCCCA AGGCGCTCGC CCGCTTCGGT CAGCTCGAAG ACCAGTTCCG CCGCAAATAC GAAGGCCTCG GCCTCGGCCT GCCCATCGTC CAGGTGCTGA CCGAACAGCA TGGCGGCCAC TTCGCCATCG AAAGCACCCC CGGCCGCGGC ACCACGGTCA CCATTACCCT CCCGCGCGAA CGCTGCCTGC CCTCCGCCCC GGACCTCGCC TGCGCTGCCG GGTAA
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Protein sequence | MDRTSIRHKP MIGMAAFLLA CLLAWAAPLP ASGETVLRPP SAAGLANGDP LMLEEGWTVY RDALVPAARF GGGCSLSFAG LEAEHVTLPD IWGPALTTRV STGHGTATYC LDLALPQTSQ ALALSLGTTR SVYAIYAVSR GRYGELEVQS LHRNGDPSRA EGIVAVNPTA PVIPLPHDLR QFRLVVQLAN YVHKQGGIVD VPSIGFLQKM DSAERRASAL PTALALVLVL VAILTLVVGR STSNPRGHLI FAALCATSAL RVVLVSNLIW DYLPSFPEAR KYDLEYFSLF LVAPAYYAFI CYLFREGRVV WVDKLIYGVS AVFCLFALLV APFMAPGTVT LLREPFQLLW AVIILAVGVT ILRTLLMEKE ARRDALAVLL AAMVYFAYEV LTSMKIIGAS MELSNLLIVF VTMLHIRAFM LKYRRVEGER DTLHRTLRDA NAVLEARADE LTRALMAAEQ ASLAKSEFLA TMSHELRTPL NAIIGFSETM KLEVFGPLGH GKYAEYAKDI NNSGTHLLDL VSDILDISRV ESGTDALNEE EVCIESVARA VLAATAAQAG KAEVVCRLDA DAGLPPVFAD ERKIRQILTN LVGNAIKFNV PGGTVAVTLA RDESGYRIAV ADTGIGIVAE DIPKALARFG QLEDQFRRKY EGLGLGLPIV QVLTEQHGGH FAIESTPGRG TTVTITLPRE RCLPSAPDLA CAAG
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