Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_3474 |
Symbol | |
ID | 5456947 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 3720017 |
End bp | 3720415 |
Gene Length | 399 bp |
Protein Length | 132 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640879059 |
Product | DoxX family protein |
Protein accession | YP_001414730 |
Protein GI | 154253906 |
COG category | [S] Function unknown |
COG ID | [COG2259] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 0.418038 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGTTT CCAACGATAT CGTGATGCTC GCCGGCCGCG TCCTGCTCGC CGCTCTTTTC ATCCTCGCCG GCCTCAACAA GGCCTTGGGC GCGGAGGGCA CGATAGGCTT CATCGAATCC AAGGGTCTGC CGCTTCCGCA GGTGATTTAT GTGCTGACTG TCGCGCTTGA GCTGGGCGGC GGCATCCTGC TGCTGGTCGG TTTCCAGGCG CGTCTTGTCG GTCTCGCCTT CGCGGTTTTC TGCGTGATGA CGGCGCTGAT TTTTCACCCC GGCCTGTCGG ATCCGTCCTT CCTGAAGAAC CTCGCGCTCG CCGGCGGCTT CCTTTATGTC TTCGCCTTCG GCGCCGGTGC CTACAGCATA GACGGCAGGC GCGGCGCGCC GGCAGTCGCT GCGGCATAA
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Protein sequence | MKVSNDIVML AGRVLLAALF ILAGLNKALG AEGTIGFIES KGLPLPQVIY VLTVALELGG GILLLVGFQA RLVGLAFAVF CVMTALIFHP GLSDPSFLKN LALAGGFLYV FAFGAGAYSI DGRRGAPAVA AA
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