| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3370 |
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| Symbol | |
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| ID | 5456015 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 3611377 |
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| End bp | 3612483 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640878960 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001414631 |
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| Protein GI | 154253807 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.948815 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 0.259543 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACGA TCAAGACGGA AATCCTGGCG CGCCGGTTGC TCGCTTCGGG CCTGGCTGTC
GCCCTCGCCA TATCGCCCGC CCTGGCACAG GGCGACCGCG ATCATGACCA TGGCGGCGAC
AAGGCCGTGG AGGAACATCA CGACCATCGT GATGGGAGTG AAAGCGAAGA GGAGCACGAC
GCTCATGGCG AGGACGCCCA TGACGGTCAC GGCCACGACG AAGAGGATGG ACATGACGAG
AGCGGCCACG GGCACAGCCA TGACGACGAG CATGACGAGC ATGAAGATGG TCATGTAACG
CTGACGCCTG CGCAGATCGG CAACGCACGG CTGGAAATCG CCGAGGCGGG GCCGGGCATG
CTCCGCCCCT CGCTCAATCT TTTCGGTATC GTCAGGCCCG ATCTCGACAG GCTTGTCCAT
GTCGTGCCGC GCTTTCCGGG GATCGTGATC GGTGTGAACA AGCGCCTTGG CGACCGCGTG
GAGCGGGGAG ACATTCTGGC GACCATTGAA AGCAACGAGA GCCTGCGCGC CTATCCGCTC
ATCGCTTCCG TTTCCGGGCG CGTCATCCTC GGAAATGTCG TGCCCGGCCA GTTCGCGGGA
ACGGACGATC CGCTGATGGT CGTCGCCGAT CTTTCGACCG TCTGGCTCGA TCTTCAGGTT
CATCGCCACG ATGCCGGCCT CATCCGCGAG GGACAGCGTG TCGTTTTTCC ATCGGAGAAT
GGCGGCGGCG AGGTCGAGGC GGTGATTTCC TATGTGTCGC CTATCGCCGC GCAGGACACG
CAGAGCGTAC TCGCCCGCGC GACGGTCGCG AACCCGGAGG GCCATCTTCA GCCCGGACTT
TTTGTTACGG CCTCGGTGAT GCAGGAACCC TTAGCGGCGC CGGTGACGGT GAAGCGCGAG
GCGATCCTCC ATGACGGTGC GGCGGCATTC GTCTATGTGC CGGGCGAGGA AGGCTCCTTC
GAGCGGGCGC CGGTGAAGAC CGGCCGGAGC GACGGCGTCC GCATCGAAAT CCTCGAAGGG
CTCGATGCAG GCGCATCCTA TGTCGCGGGC AATGCCTTCC TCCTCAAGGC CGAGGCGGGC
AAGAACGCCG CCGCGCATTC GCATTGA
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| Protein sequence | MKTIKTEILA RRLLASGLAV ALAISPALAQ GDRDHDHGGD KAVEEHHDHR DGSESEEEHD
AHGEDAHDGH GHDEEDGHDE SGHGHSHDDE HDEHEDGHVT LTPAQIGNAR LEIAEAGPGM
LRPSLNLFGI VRPDLDRLVH VVPRFPGIVI GVNKRLGDRV ERGDILATIE SNESLRAYPL
IASVSGRVIL GNVVPGQFAG TDDPLMVVAD LSTVWLDLQV HRHDAGLIRE GQRVVFPSEN
GGGEVEAVIS YVSPIAAQDT QSVLARATVA NPEGHLQPGL FVTASVMQEP LAAPVTVKRE
AILHDGAAAF VYVPGEEGSF ERAPVKTGRS DGVRIEILEG LDAGASYVAG NAFLLKAEAG
KNAAAHSH
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