| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3357 |
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| Symbol | |
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| ID | 5454654 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 3595450 |
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| End bp | 3596706 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640878947 |
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| Product | Beta-ketoacyl synthase |
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| Protein accession | YP_001414618 |
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| Protein GI | 154253794 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
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| TIGRFAM ID | [TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.946048 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGCGAG TTGTCGTCAC GGGTGTGGGT ATGGTGTCGC CGCTGGGCTG CGGCGTCGAA
ACCACTTGGA ACCGGATGCT CAAGGGTGAA TCCGGAGCCC GCAAGATCGA GAAGTTCGAC
GTCTCCGATC TCCCCTGCAA GATCGCCATG CCGGTTCCAC GCGAGGGCGA AGGCGCTTTC
AATCCCGACG ACTGGATGGA GCCGAAGGAA TCGAAGCGTG TCGACGACTT CATCGTCTAC
GCCATGTCCG CCGCTACTCA GGCTCTGAGC GATGCGGGCT GGAAGCCGGA AACCGAAGAA
GAAAAGTGCC GCACCGGCAC CATGATCGGC TCGGGCATCG GCGGTCTCGA AGGCATTGCC
GAAGAAGCCT ACACCCTGCG CGACAAGGGT CCGCGCCGCG TCAGCCCCTT CTTCATCACC
GGCCGTCTCA TCAACCTCGC CTCCGGTTAC GTCTCCATAA AGCACGGCCT CAAGGGGCCG
AACCATTCCG TCGTCACGGC CTGCTCGACC GGCGCTCATG CCATTGGCGA TGCGGCGCGT
CTGATCATGC TCGATGACGC GGATGTGATG GTCGCCGGCG GCGCCGAATC CGCGATTTGC
CGCATCGGCA TCGCGGGCTT CGCGGCCTGC CGCGCCCTCT CCACCGGCTT CAACGACACG
CCGGAGCGCG CCTCGCGTCC CTATGACAGC GATCGCGACG GCTTCGTCAT GGGTGAAGGC
GCCGGCGTCG TCGTCCTCGA GGAATACGAG CACGCCAAGG CCCGTGGCGC GAAGATTTAC
GGTGAAGTCG TCGGCTATGG CCTCTCGGGC GATGCCTATC ACGTGACGGC GCCGCCGGAA
GATGGTGACG GCGGTTTCCG CTCGATGCAG GCCGCGCTCA AGCGTGCCGG CATTTCGCCT
TCCGATCTCG ACTACATCAA CGCCCACGGT ACCTCGACCA TGGCGGACAC GATCGAGCTC
GGGGCCGTCA CGCGCCTTCT GGGCAATGCC GTTGAAACGG TTTCGATGTC GTCGACCAAA
TCGTCGGTCG GCCACCTGCT TGGCGCGGCC GGCGCCGTGG AGGCGATTTT CTGCCTGCTC
GCCATGCGCG ACAGCAAGCT GCCGCCGACG ATCAACCTCG ACAATCCCTC GGTGGACACA
AGGATCGACC TCGTGCCCAA CAAGGCGCGC GACAAGAAAG TGAACTACGC CTTGAGCAAT
TCCTTCGGCT TCGGGGGTAC CAACGCGTCG CTGGTGCTGA AAAAGGTTGA TGGTTGA
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| Protein sequence | MRRVVVTGVG MVSPLGCGVE TTWNRMLKGE SGARKIEKFD VSDLPCKIAM PVPREGEGAF
NPDDWMEPKE SKRVDDFIVY AMSAATQALS DAGWKPETEE EKCRTGTMIG SGIGGLEGIA
EEAYTLRDKG PRRVSPFFIT GRLINLASGY VSIKHGLKGP NHSVVTACST GAHAIGDAAR
LIMLDDADVM VAGGAESAIC RIGIAGFAAC RALSTGFNDT PERASRPYDS DRDGFVMGEG
AGVVVLEEYE HAKARGAKIY GEVVGYGLSG DAYHVTAPPE DGDGGFRSMQ AALKRAGISP
SDLDYINAHG TSTMADTIEL GAVTRLLGNA VETVSMSSTK SSVGHLLGAA GAVEAIFCLL
AMRDSKLPPT INLDNPSVDT RIDLVPNKAR DKKVNYALSN SFGFGGTNAS LVLKKVDG
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