Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_3334 |
Symbol | |
ID | 5455703 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 3569861 |
End bp | 3571774 |
Gene Length | 1914 bp |
Protein Length | 637 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640878924 |
Product | ABC transporter related |
Protein accession | YP_001414595 |
Protein GI | 154253771 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 0.115349 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCATA TCAACGATCT GACCTTCCGA ATGGAGGGGC GCCTGCTCCT CGACCATGTC ACCGCCGCCG TGCCCCCCGG GCAACGGACG GGCTTTGTCG GCCGTAACGG TACCGGTAAA TCGACGCTGC TGAAGCTCAT CACGGGCGAA TATACGCCCG AGACGGGCGG TATCAGCTTT CCGAAAAGCT GGCGCATCGG CATGGTCCGG CAAGAAGTGC TGGCCGGTCC GACGTCGCTT CTCGACACGG TGCTTGCCGC CGATCTCGAG CGGTCATCGC TGCTCGCCGA AGCGGAGACG GCGAGCGACC CTCACCGGAT TGCCGAGATC CATACGAGGC TGGCCGATAT GGGCGCCCAT GCGGCCCCTG CCCGCGCGGC CACCATTCTT TCCGGTCTCG GCTTCGACGA GGCGGCGCAG GCGCGGCCTT GCTCGGATTT CTCGGGCGGC TGGCGGATGC GCGTGGCTCT TGCGGCGGTG CTCTTTTCGG AGCCCGACCT GCTGCTGCTC GACGAGCCGA CCAACTATCT CGATCTCGAA GGCACGATCT GGCTTGAGGA CTATCTGCGG TCCTATCCCT ATACCGTGCT CATCGTCAGC CATGACCGCG ACCTCCTGAA CAATGTCGCG CAGAACATCC TGCATCTCGA ACACAAGAAG CTCACGGTCT ATAGCGGCAA TTACGACCGC TTCGACCGGA CGCGGCGCGA AAAGCTGATG CTGCAGCTTT CGATGAAGAA GAAGCAGGAC GATGCGCGCC GCCACATGGA GAGCTTCATC GAACGCTTCA AGGCGAAGGC GTCGAAGGCA CGCCAGGCGC AGAGCCGCAT GAAGGCGCTC GCGAAGATGG AACCCATCGC CGACATATTG AACGAGCGCG TGCTGCCGTT CCGTTTTCCG GCGCCAGACA AGCCGCTCGC CTCGCCGATC ATCCGGCTAG AACATGCGAG CGTCGGATAC GAGCCCGGCA AGCCGGTGCT GAAGGATCTC GATCTCCGCA TCGACCAGGA CGACCGCATC GCGCTTCTCG GTGCGAACGG CAACGGCAAG TCGACATTTG CGAAACTGCT ATGCGACCGG TTGCAGGTGA CGGGCGGACA CAAATACGAT TCAAAGAAGC TGCGTATCGC TTATTTCGCG CAGCATCAGC TCGACGAACT CAATATGGGC GATACGCCTT ACGAGCATTT CCGCGAGCTG AAACCGGATG CGACGCAGGC ACAAGTGCGC GCCATTGCAG GCTCCTACGG GTTCGGCGCG GACAAGGCGG ATACGAAAGT CGAGAAGCTT TCAGGCGGCG AGAAGGCACG CCTTTTGTTC GCCATCGCGA CTTTTCACAA GCCGCACATG ATCATCCTCG ACGAACCGAC GAACCATCTG GACGTCGACA GCCGCGAGGC GCTGGTCATG GCGATCAACG AATATGACGG CGCTTTCATT CTGATTTCGC ATGACCGGCA TCTTGTCGAA ACATGCGCGG ATCGTTTGTG GCTTGTCGCG GACGGAACCG TTGCGCCTTA TGATGGCGAT CTCAACGACT ACCGGAAATG GCTGCTCGAT CCGGCGCGGC GCATCAAACC CCTGGTCGCG GAAGACGAAG AAGGAGAGGC CGCGCCTGCG CCGGCACCTC GCCCATCGAA CGACAAGAAG GAAGCACGAC GCCTTGCCGC GCAGAAGCGC GAGCAGATGG CGCCGTTAAA GAAAAAAGCT CAGGCCGCCG AGCAAGAGGT TGCGCGCATT CAGAAAATCA TCGAAACGCT GACCGCGAAA CTTGGCGATC CGAAGGTCGC CGGAGACCCC GGAGCGAGCG CCGCGACGGC GAAGGAACGG GCCGATGCGA TGAAGGCGCT GGCGCGGGCG GAGGAGGCCT GGCTGGAGGC AAGCTCGGCC TATGAGGAGG CGATGGCGGA CTAA
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Protein sequence | MLHINDLTFR MEGRLLLDHV TAAVPPGQRT GFVGRNGTGK STLLKLITGE YTPETGGISF PKSWRIGMVR QEVLAGPTSL LDTVLAADLE RSSLLAEAET ASDPHRIAEI HTRLADMGAH AAPARAATIL SGLGFDEAAQ ARPCSDFSGG WRMRVALAAV LFSEPDLLLL DEPTNYLDLE GTIWLEDYLR SYPYTVLIVS HDRDLLNNVA QNILHLEHKK LTVYSGNYDR FDRTRREKLM LQLSMKKKQD DARRHMESFI ERFKAKASKA RQAQSRMKAL AKMEPIADIL NERVLPFRFP APDKPLASPI IRLEHASVGY EPGKPVLKDL DLRIDQDDRI ALLGANGNGK STFAKLLCDR LQVTGGHKYD SKKLRIAYFA QHQLDELNMG DTPYEHFREL KPDATQAQVR AIAGSYGFGA DKADTKVEKL SGGEKARLLF AIATFHKPHM IILDEPTNHL DVDSREALVM AINEYDGAFI LISHDRHLVE TCADRLWLVA DGTVAPYDGD LNDYRKWLLD PARRIKPLVA EDEEGEAAPA PAPRPSNDKK EARRLAAQKR EQMAPLKKKA QAAEQEVARI QKIIETLTAK LGDPKVAGDP GASAATAKER ADAMKALARA EEAWLEASSA YEEAMAD
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