| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3306 |
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| Symbol | |
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| ID | 5456830 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3540358 |
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| End bp | 3541428 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640878897 |
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| Product | dTDP-glucose 4,6-dehydratase |
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| Protein accession | YP_001414568 |
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| Protein GI | 154253744 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1088] dTDP-D-glucose 4,6-dehydratase |
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| TIGRFAM ID | [TIGR01181] dTDP-glucose 4,6-dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.310142 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 0.339449 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGTTA TAGTTACAGG CGGCGCTGGG TTCATCGGAT CTGCGGTTAT CCGGCTTTTA
ATCAACGAAA CCGAACATGA AGTGCTCAAC CTCGACTGCC TGACTTATGC CAGCGATCAG
GCCGCCCTCT CTTCCGTCTG CGAACATCCG CGTTACAGGT TTTCCCATAC AGATATCCGC
AAGCCTGACG CACTCAGGAG GGTCTTTCGA GATTATCGCC CCCATCTCGT GATGCATCTG
GCGGCAGAGT CGCATGTTGA TCGCTCCATT GATGCGCCTG CGGATTTTAT CGAAACTAAT
GTAGTCGGTA CGGTCAATCT TCTTGAGACT GCGCGAAGCT ACTGGTCTTC TCTCGATGGA
GCGGAGAAGC GCGCTTTTCG GTTCCACCAC GTGTCGACCG ACGAGGTCTA TGGAAGCCTG
GGAGCAGAAG GCTACTTCAC CGAAGAAACG GCCTACGCTC CTAATTCCCC CTACTCAGCA
TCGAAGGCCG CATCGGATCA TATGGTGCGC GCATGGCATG CGACCTATGG CATACCTGTA
GTAACGAGCA ACTGCTCAAA CAATTTCGGC CCCCATCAGT TTCCGGAAAA ACTGATCCCG
TTGACCATCA TCAACGCCAT TGAGGGCAAG AGCCTGCCGG TATACGGCAA CGGCATGAAT
ATTCGTGACT GGCTGTTCGT CGAGGATCAT GCGCGCGCGC TCATGACGAT AGCTCTACGC
GGGCGCGTCG GTGAAACTTA CAATGTCGGC GGCGACGCCG AACGCACCAA CATAGAAGTA
GTTCGCTCCA TCTGCAGCCT TCTGGACGAG ATTTTGCCTC ACTCATCGTT TCGTCCCCAT
GAAAACCTGA TCCGGTTCGT TGCCGACCGG CCAGGCCACG ATATGCGTTA CGCGATAGAC
ACATCGAAAA TCCGGCGCGA GTTGGGTTGG CAGCCGGTCG AAAGCTTTGA AAGCGGATTG
AGAAAGACTG TTGAATGGTA CATCGACAAC AGAGCCATCT GGACGCGGTT GCTTCTCGAC
CGCTACCAAG GTGAACGGCT AGGCCTTATG GGCGCCCGTC AGGCGATATG A
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| Protein sequence | MRVIVTGGAG FIGSAVIRLL INETEHEVLN LDCLTYASDQ AALSSVCEHP RYRFSHTDIR
KPDALRRVFR DYRPHLVMHL AAESHVDRSI DAPADFIETN VVGTVNLLET ARSYWSSLDG
AEKRAFRFHH VSTDEVYGSL GAEGYFTEET AYAPNSPYSA SKAASDHMVR AWHATYGIPV
VTSNCSNNFG PHQFPEKLIP LTIINAIEGK SLPVYGNGMN IRDWLFVEDH ARALMTIALR
GRVGETYNVG GDAERTNIEV VRSICSLLDE ILPHSSFRPH ENLIRFVADR PGHDMRYAID
TSKIRRELGW QPVESFESGL RKTVEWYIDN RAIWTRLLLD RYQGERLGLM GARQAI
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