Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_3262 |
Symbol | |
ID | 5456908 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 3484185 |
End bp | 3485633 |
Gene Length | 1449 bp |
Protein Length | 482 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640878853 |
Product | FeS assembly protein SufB |
Protein accession | YP_001414524 |
Protein GI | 154253700 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component |
TIGRFAM ID | [TIGR01980] FeS assembly protein SufB |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.47258 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTGCCG TACGGGAAAC CGTCGAAACC GTGGGTGAAG TGGAGAAGTA CAAGTACGGC TTCTTCACCG ACATCGAATC TGAGAAAGCG CCTCTGGGGC TGACGGAGGA CACGGTTCGT TACATTTCCG CGAAGAAGAA CGAGCCGGAA TGGTTGCTCG AATGGCGTCT TGCGGCTTTC CGTCGCTGGC TCACCATGAC CGAGCCGACC TGGGCGAAAG TGACCTATCC GCCGATCGAC TTTCAGGATG CGTACTATTA TTCCGCACCG AAGCAGATGG CGAAGCTCGA CAGCCTCGAT CAAGTCGATC CGAAGCTTCT CGAAACCTAT GCAAAGCTCG GCATTCCGCT TACCGAGCAG AAGATGCTCG CCGGCATCGC TGTGGATGCA GTTTTCGACA GTGTGTCGGT GGTGACGACC TTCAAGGAGA AGCTCGCCGA AGTTGGTGTC ATTTTCTGTC CAATGTCGGA GGCGGTGCAA AAACACCCCG AGCTCGTGAA AAAGTATCTG GGGTCGGTCG TGCCTATCTC GGACAACTTC TACGCAACGC TCAACTCTGC CGTCTTTTCT GAAGGCTCGT TCGTCTACAT TCCTGAGGGC GTTCGCTGCC CAATGGAATT GTCGACCTAT TTTCGCATCA ACGAAAAGCA GACGGGCCAG TTTGAGCGCA CACTTATCAT CGCCGACAAA GGCTCATATG TGAGCTACCT CGAAGGTTGC ACGGCACCTC AGCGCGACGA GAACCAGCTT CACGCTGCTG TTGTCGAACT CGTCGCCCAT GACGACGCGG AGATCAAGTA CTCTACGGTG CAGAACTGGT TTCCCGGCGA TGAGGAAGGG AAGGGCGGTG TCTACAACTT CGTGACGAAG CGCGGCGATT GCCGTGGCAC AAACTCGAAG ATTTCGTGGA CGCAGGTCGA GACGGGGTCG GCCATCACAT GGAAGTACCC GAGCTGCATC CTGCGCGGCG ACAATTCGCG CGGCGAGTTC TATTCGATTG CTATTTCCAA CGGCCGTCAG CAGGTCGACA GCGGCACGAA GATGATCCAT CTCGGCCGCA ATACGACAAG CCGTATCATT TCGAAGGGTA TTGCCGCAGG TCACTCCTCG AACACCTATC GGGGTCTCGT CAGCGTCCAT CGCAAGGCAG AAGATGTCCG GAACTTTACG CAGTGTGACA GCCTGCTGAT CGGAGATCGT TGTTCGGCGC ACACGGTCCC CTACATCGAG ACGAAGAACC CGACTGCCCT TCTCGAACAT GAAGCGACCA CGTCGAAGAT CAGTGACGAT CAGCTTTTCT ATTGCATGCA GCGCGGTATC GGCGAAGAGG AAGCCGTGGC TCTGATCGTC AATGGCTTCT GCCGCGATGT GCTGCAGCAA TTGCCGATGG AATTTGCCGT AGAAGCGCAA AAGCTTGTCG GCATCAGTCT TGAAGGAAGC GTCGGCTGA
|
Protein sequence | MAAVRETVET VGEVEKYKYG FFTDIESEKA PLGLTEDTVR YISAKKNEPE WLLEWRLAAF RRWLTMTEPT WAKVTYPPID FQDAYYYSAP KQMAKLDSLD QVDPKLLETY AKLGIPLTEQ KMLAGIAVDA VFDSVSVVTT FKEKLAEVGV IFCPMSEAVQ KHPELVKKYL GSVVPISDNF YATLNSAVFS EGSFVYIPEG VRCPMELSTY FRINEKQTGQ FERTLIIADK GSYVSYLEGC TAPQRDENQL HAAVVELVAH DDAEIKYSTV QNWFPGDEEG KGGVYNFVTK RGDCRGTNSK ISWTQVETGS AITWKYPSCI LRGDNSRGEF YSIAISNGRQ QVDSGTKMIH LGRNTTSRII SKGIAAGHSS NTYRGLVSVH RKAEDVRNFT QCDSLLIGDR CSAHTVPYIE TKNPTALLEH EATTSKISDD QLFYCMQRGI GEEEAVALIV NGFCRDVLQQ LPMEFAVEAQ KLVGISLEGS VG
|
| |