| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3261 |
|---|
| Symbol | |
|---|
| ID | 5453909 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | - |
|---|
| Start bp | 3483411 |
|---|
| End bp | 3484160 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640878852 |
|---|
| Product | FeS assembly ATPase SufC |
|---|
| Protein accession | YP_001414523 |
|---|
| Protein GI | 154253699 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0396] ABC-type transport system involved in Fe-S cluster assembly, ATPase component |
|---|
| TIGRFAM ID | [TIGR01978] FeS assembly ATPase SufC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 56 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTGAGA TCAAGAACCT GCATGTGAAG GTGGATGGGA AAGAGATTCT GAAAGGAATC
GATCTCAACG TTCCTGCAGG TGAGGTGCAT GCCATCATGG GGCCAAATGG CTCCGGGAAA
TCTACGCTCT CTTATGTTCT TGCGGGACGT GATGGCTATG AGGTGACAGA AGGATCGATC
CGCTTCAAGG GGCGCGATCT TCTGGAAATG AGTGTCGATG AACGGGCTGC CGCTGGAATT
TTCCTGGCCT TCCAGTATCC GCTTGAAATC CCTGGCGTCA CCACCATGAC TTTTCTCAAG
ACCGCGCTCA ATGCGCAGCG CAAGGCCCGG GGAGAGGACG AACTCGATGC CGTTCGTTTT
CTGAAACTCG TGCGCGAAAA GGCGAAGCCG CTCAACGTTT CCGACGACAT GCTGAAACGT
GCGTTGAACG TCGGTTATTC GGGTGGTGAA AAGAAGCGTG CAGAGATTTT GCAGATGTCG
CTGCTTGAAC CCGCACTCGC AGTGCTTGAT GAAACTGATT CCGGACTCGA TATCGACGCA
TTGAAGACTG TTGCGGATGG CGTCAACTCT CTTCGCGCAT CCGATCGGGC GATGGTTGTG
ATTACACATT ACCAGCGCCT TCTGGATTAC ATCGTGCCTG ACGTGGTGCA CGTACTGTCG
AAGGGCCGCA TTGTGAAAAC GGGCGGCAAG GATCTGGCAC TCGAACTCGA GAAGTCCGGC
TATGCCGCTT ACGGCGCGGA CGCCGCGTGA
|
|---|
| Protein sequence | MLEIKNLHVK VDGKEILKGI DLNVPAGEVH AIMGPNGSGK STLSYVLAGR DGYEVTEGSI
RFKGRDLLEM SVDERAAAGI FLAFQYPLEI PGVTTMTFLK TALNAQRKAR GEDELDAVRF
LKLVREKAKP LNVSDDMLKR ALNVGYSGGE KKRAEILQMS LLEPALAVLD ETDSGLDIDA
LKTVADGVNS LRASDRAMVV ITHYQRLLDY IVPDVVHVLS KGRIVKTGGK DLALELEKSG
YAAYGADAA
|
|---|
| |